MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 5:100824133-100946482

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Gm26286	5	100831281 to 100831414	133	+	snoRNA gene	predicted gene, 26286
4930458D05Rik	5	100840797 to 100847167	6370	-	antisense lncRNA gene	RIKEN cDNA 4930458D05 gene
Cpgi16118	5	100845441 to 100847003	1562		CpG island	CpG island 16118
Tssr47490	5	100845709 to 100845728	19	+	TSS region	transcription start site region 47490
Gpat3	5	100845713 to 100899102	53389	+	protein coding gene	glycerol-3-phosphate acyltransferase 3
Tssr52122	5	100845736 to 100845743	7	-	TSS region	transcription start site region 52122
Tssr47491	5	100845874 to 100845882	8	+	TSS region	transcription start site region 47491
Tssr52123	5	100846092 to 100846130	38	-	TSS region	transcription start site region 52123
Tssr47492	5	100846278 to 100846293	15	+	TSS region	transcription start site region 47492
Tssr47493	5	100846417 to 100846449	32	+	TSS region	transcription start site region 47493
Tssr47494	5	100846450 to 100846508	58	+	TSS region	transcription start site region 47494
Gm46917	5	100847559 to 100848964	1405	+	lncRNA gene	predicted gene, 46917
Tssr47495	5	100862017 to 100862021	4	+	TSS region	transcription start site region 47495
Gm42987	5	100884133 to 100886482	2349	+	unclassified gene	predicted gene 42987
Gm36793	5	100910003 to 100913707	3704	-	lincRNA gene	predicted gene, 36793
Gm36740	5	100913193 to 100921169	7976	+	lncRNA gene	predicted gene, 36740
Tssr52124	5	100916541 to 100916552	11	-	TSS region	transcription start site region 52124
Tssr47496	5	100916754 to 100916784	30	+	TSS region	transcription start site region 47496