Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:100579486-100819683

37 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Tssr47485	5	100583407 to 100583443	36	+	TSS region	transcription start site region 47485
Gm43510	5	100592404 to 100592756	352	-	pseudogene	predicted gene 43510
Tssr52108	5	100593643 to 100593644	1	-	TSS region	transcription start site region 52108
Tssr52109	5	100595222 to 100595270	48	-	TSS region	transcription start site region 52109
Tssr52110	5	100599263 to 100599268	5	-	TSS region	transcription start site region 52110
Tssr52111	5	100604195 to 100604229	34	-	TSS region	transcription start site region 52111
D5Mit157	5	100629942 to 100630065	123		DNA segment	DNA segment, Chr 5, Massachusetts Institute of Technology 157
W10q16	5	100630065 to 31975890	-68654175		QTL	weight 10 weeks QTL 16
Lgq6	5	100630065 to 31975890	-68654175		QTL	late growth QTL 6
Tssr52112	5	100643212 to 100643252	40	-	TSS region	transcription start site region 52112
Tssr47486	5	100643356 to 100643368	12	+	TSS region	transcription start site region 47486
Tssr1557	5	100650489 to 100650512	23	+	TSS region	transcription start site region 1557
Tssr47487	5	100650541 to 100650553	12	+	TSS region	transcription start site region 47487
Tssr47488	5	100650636 to 100650644	8	+	TSS region	transcription start site region 47488
Coq2	5	100654723 to 100674289	19566	-	protein coding gene	coenzyme Q2 4-hydroxybenzoate polyprenyltransferase
Tssr1558	5	100660900 to 100660902	2	+	TSS region	transcription start site region 1558
D5Mit208	5	100667184 to 100667310	126		DNA segment	DNA segment, Chr 5, Massachusetts Institute of Technology 208
Gm15777	5	100670859 to 100678105	7246	+	antisense lncRNA gene	predicted gene 15777
Cpgi16113	5	100673707 to 100674445	738		CpG island	CpG island 16113
Tssr52113	5	100674230 to 100674281	51	-	TSS region	transcription start site region 52113
Hpse	5	100679486 to 100719683	40197	-	protein coding gene	heparanase
Tssr52114	5	100680069 to 100680105	36	-	TSS region	transcription start site region 52114
Cpgi16114	5	100719260 to 100719977	717		CpG island	CpG island 16114
Tssr52115	5	100719663 to 100719674	11	-	TSS region	transcription start site region 52115
Tssr52116	5	100719675 to 100719706	31	-	TSS region	transcription start site region 52116
Gm36619	5	100727099 to 100754285	27186	+	lncRNA gene	predicted gene, 36619
Cpgi16115	5	100728875 to 100729029	154		CpG island	CpG island 16115
Helq	5	100762145 to 100798598	36453	-	protein coding gene	helicase, POLQ-like
Cpgi16116	5	100798050 to 100799018	968		CpG island	CpG island 16116
Tssr52117	5	100798532 to 100798549	17	-	TSS region	transcription start site region 52117
Tssr52118	5	100798567 to 100798610	43	-	TSS region	transcription start site region 52118
Tssr47489	5	100798735 to 100798770	35	+	TSS region	transcription start site region 47489
Gm43511	5	100798749 to 100801045	2296	+	unclassified gene	predicted gene 43511
Mrps18c	5	100798759 to 100804467	5708	+	protein coding gene	mitochondrial ribosomal protein S18C
Abraxas1	5	100805192 to 100820965	15773	-	protein coding gene	BRCA1 A complex subunit
Tssr52119	5	100813495 to 100813538	43	-	TSS region	transcription start site region 52119
Gm43513	5	100814210 to 100815285	1075	-	unclassified gene	predicted gene 43513