Gene symbol | Chromo- some |
Coordinates (bp, mm10) | Size (bp) | Strand | Feature Type | Gene name |
---|---|---|---|---|---|---|
Plac8 | 5 | 18520 | - | protein coding gene | placenta-specific 8 | |
Tssr47483 | 5 | 13 | + | TSS region | transcription start site region 47483 | |
Tssr47484 | 5 | 17 | + | TSS region | transcription start site region 47484 | |
Tssr52105 | 5 | 33 | - | TSS region | transcription start site region 52105 | |
Tssr52106 | 5 | 11 | - | TSS region | transcription start site region 52106 | |
Tssr52107 | 5 | 19 | - | TSS region | transcription start site region 52107 | |
Tssr47485 | 5 | 36 | + | TSS region | transcription start site region 47485 | |
Gm43510 | 5 | 352 | - | pseudogene | predicted gene 43510 | |
Tssr52108 | 5 | 1 | - | TSS region | transcription start site region 52108 | |
Tssr52109 | 5 | 48 | - | TSS region | transcription start site region 52109 | |
Tssr52110 | 5 | 5 | - | TSS region | transcription start site region 52110 | |
Tssr52111 | 5 | 34 | - | TSS region | transcription start site region 52111 | |
D5Mit157 | 5 | 123 | DNA segment | DNA segment, Chr 5, Massachusetts Institute of Technology 157 | ||
W10q16 | 5 | -68654175 | QTL | weight 10 weeks QTL 16 | ||
Lgq6 | 5 | -68654175 | QTL | late growth QTL 6 | ||
Tssr52112 | 5 | 40 | - | TSS region | transcription start site region 52112 | |
Tssr47486 | 5 | 12 | + | TSS region | transcription start site region 47486 | |
Tssr1557 | 5 | 23 | + | TSS region | transcription start site region 1557 | |
Tssr47487 | 5 | 12 | + | TSS region | transcription start site region 47487 | |
Tssr47488 | 5 | 8 | + | TSS region | transcription start site region 47488 | |
Coq2 | 5 | 19566 | - | protein coding gene | coenzyme Q2 4-hydroxybenzoate polyprenyltransferase | |
Tssr1558 | 5 | 2 | + | TSS region | transcription start site region 1558 | |
D5Mit208 | 5 | 126 | DNA segment | DNA segment, Chr 5, Massachusetts Institute of Technology 208 | ||
Gm15777 | 5 | 7246 | + | antisense lncRNA gene | predicted gene 15777 | |
Cpgi16113 | 5 | 738 | CpG island | CpG island 16113 | ||
Tssr52113 | 5 | 51 | - | TSS region | transcription start site region 52113 | |
Hpse | 5 | 40197 | - | protein coding gene | heparanase | |
Tssr52114 | 5 | 36 | - | TSS region | transcription start site region 52114 | |
Cpgi16114 | 5 | 717 | CpG island | CpG island 16114 | ||
Tssr52115 | 5 | 11 | - | TSS region | transcription start site region 52115 | |
Tssr52116 | 5 | 31 | - | TSS region | transcription start site region 52116 | |
Gm36619 | 5 | 27186 | + | lncRNA gene | predicted gene, 36619 | |
Cpgi16115 | 5 | 154 | CpG island | CpG island 16115 | ||
Helq | 5 | 36453 | - | protein coding gene | helicase, POLQ-like | |
Cpgi16116 | 5 | 968 | CpG island | CpG island 16116 | ||
Tssr52117 | 5 | 17 | - | TSS region | transcription start site region 52117 | |
Tssr52118 | 5 | 43 | - | TSS region | transcription start site region 52118 | |
Tssr47489 | 5 | 35 | + | TSS region | transcription start site region 47489 | |
Gm43511 | 5 | 2296 | + | unclassified gene | predicted gene 43511 | |
Mrps18c | 5 | 5708 | + | protein coding gene | mitochondrial ribosomal protein S18C | |
Abraxas1 | 5 | 15773 | - | protein coding gene | BRCA1 A complex subunit | |
Tssr52119 | 5 | 43 | - | TSS region | transcription start site region 52119 | |
Gm43513 | 5 | 1075 | - | unclassified gene | predicted gene 43513 | |
Cpgi16117 | 5 | 945 | CpG island | CpG island 16117 | ||
Gm43514 | 5 | 423 | - | sense intronic lncRNA gene | predicted gene 43514 | |
Tssr52120 | 5 | 3 | - | TSS region | transcription start site region 52120 | |
Tssr52121 | 5 | 46 | - | TSS region | transcription start site region 52121 | |
Gm26286 | 5 | 133 | + | snoRNA gene | predicted gene, 26286 | |
4930458D05Rik | 5 | 6370 | - | antisense lncRNA gene | RIKEN cDNA 4930458D05 gene | |
Cpgi16118 | 5 | 1562 | CpG island | CpG island 16118 | ||
Tssr47490 | 5 | 19 | + | TSS region | transcription start site region 47490 | |
Gpat3 | 5 | 53389 | + | protein coding gene | glycerol-3-phosphate acyltransferase 3 | |
Tssr52122 | 5 | 7 | - | TSS region | transcription start site region 52122 | |
Tssr47491 | 5 | 8 | + | TSS region | transcription start site region 47491 | |
Tssr52123 | 5 | 38 | - | TSS region | transcription start site region 52123 | |
Tssr47492 | 5 | 15 | + | TSS region | transcription start site region 47492 | |
Tssr47493 | 5 | 32 | + | TSS region | transcription start site region 47493 | |
Tssr47494 | 5 | 58 | + | TSS region | transcription start site region 47494 | |
Gm46917 | 5 | 1405 | + | lncRNA gene | predicted gene, 46917 | |
Tssr47495 | 5 | 4 | + | TSS region | transcription start site region 47495 | |
Gm42987 | 5 | 2349 | + | unclassified gene | predicted gene 42987 | |
Gm36793 | 5 | 3704 | - | lincRNA gene | predicted gene, 36793 | |
Gm36740 | 5 | 7976 | + | lncRNA gene | predicted gene, 36740 | |
Tssr52124 | 5 | 11 | - | TSS region | transcription start site region 52124 | |
Tssr47496 | 5 | 30 | + | TSS region | transcription start site region 47496 | |
n-TDgtc1 | 5 | 71 | - | tRNA gene | nuclear encoded tRNA aspartic acid 1 (anticodon GTC) | |
4930447E19Rik | 5 | 701 | unclassified gene | RIKEN cDNA 4930447E19 gene | ||
D5Mit22.3 | 5 | 124 | DNA segment | DNA segment, Chr 5, Massachusetts Institute of Technology 22.3 | ||
D5Mit22 | 5 | 128 | DNA segment | DNA segment, Chr 5, Massachusetts Institute of Technology 22 | ||
Cpgi16119 | 5 | 433 | CpG island | CpG island 16119 | ||
D5Mit9 | 5 | 147 | DNA segment | DNA segment, Chr 5, Massachusetts Institute of Technology 9 | ||
rs | 5 | -65535033 | heritable phenotypic marker | recessive spotting | ||
D5Mit207 | 5 | 165 | DNA segment | DNA segment, Chr 5, Massachusetts Institute of Technology 207 | ||
Gm36851 | 5 | 13662 | - | lncRNA gene | predicted gene, 36851 | |
Tssr52125 | 5 | 11 | - | TSS region | transcription start site region 52125 | |
Tssr52126 | 5 | 32 | - | TSS region | transcription start site region 52126 | |
Gm3032 | 5 | 3915 | + | lncRNA gene | predicted gene 3032 | |
Cycs-ps2 | 5 | 291 | + | pseudogene | cytochrome c, pseudogene 2 | |
Gm42131 | 5 | 3001 | - | lncRNA gene | predicted gene, 42131 | |
Gm43103 | 5 | 801 | - | pseudogene | predicted gene 43103 | |
D5Mit156 | 5 | 106 | DNA segment | DNA segment, Chr 5, Massachusetts Institute of Technology 156 | ||
Gm29982 | 5 | 12826 | - | lncRNA gene | predicted gene, 29982 | |
Gm20484 | 5 | 3061 | + | lincRNA gene | predicted gene 20484 | |
Cpgi16120 | 5 | 1064 | CpG island | CpG island 16120 | ||
Gm42132 | 5 | 6884 | - | lncRNA gene | predicted gene, 42132 | |
Cpgi16121 | 5 | 995 | CpG island | CpG island 16121 | ||
Nkx6-1 | 5 | 5527 | - | protein coding gene | NK6 homeobox 1 | |
Tssr47497 | 5 | 9 | + | TSS region | transcription start site region 47497 | |
Cpgi16122 | 5 | 327 | CpG island | CpG island 16122 | ||
Cpgi16123 | 5 | 2834 | CpG island | CpG island 16123 | ||
Tssr52127 | 5 | 16 | - | TSS region | transcription start site region 52127 | |
Tssr52128 | 5 | 7 | - | TSS region | transcription start site region 52128 | |
Cpgi16124 | 5 | 276 | CpG island | CpG island 16124 | ||
Cpgi16125 | 5 | 216 | CpG island | CpG island 16125 | ||
Gm42133 | 5 | 1941 | - | lincRNA gene | predicted gene, 42133 | |
Cpgi16126 | 5 | 231 | CpG island | CpG island 16126 | ||
Tssr1559 | 5 | 37 | + | TSS region | transcription start site region 1559 | |
9430085M18Rik | 5 | 2264 | + | lincRNA gene | RIKEN cDNA 9430085M18 gene | |
Tssr47498 | 5 | 4 | + | TSS region | transcription start site region 47498 | |
Gm42134 | 5 | 19857 | - | lncRNA gene | predicted gene, 42134 | |
Cpgi16127 | 5 | 1354 | CpG island | CpG island 16127 | ||
Tssr47499 | 5 | 13 | + | TSS region | transcription start site region 47499 | |
Tssr47500 | 5 | 34 | + | TSS region | transcription start site region 47500 | |
Tssr47501 | 5 | 25 | + | TSS region | transcription start site region 47501 | |
Cds1 | 5 | 58728 | + | protein coding gene | CDP-diacylglycerol synthase 1 | |
Tssr47502 | 5 | 17 | + | TSS region | transcription start site region 47502 | |
Tssr47503 | 5 | 75 | + | TSS region | transcription start site region 47503 | |
Tssr47504 | 5 | 14 | + | TSS region | transcription start site region 47504 | |
Gm43273 | 5 | 2593 | + | unclassified gene | predicted gene 43273 | |
Gm43272 | 5 | 1583 | + | unclassified gene | predicted gene 43272 | |
Tssr47505 | 5 | 38 | + | TSS region | transcription start site region 47505 | |
Wdfy3 | 5 | 236965 | - | protein coding gene | WD repeat and FYVE domain containing 3 | |
Tssr52129 | 5 | 5 | - | TSS region | transcription start site region 52129 | |
Gm20548 | 5 | 8994 | + | antisense lncRNA gene | predicted gene 20548 | |
Tssr52130 | 5 | 7 | - | TSS region | transcription start site region 52130 | |
Tssr52131 | 5 | 5 | - | TSS region | transcription start site region 52131 | |
Tssr52132 | 5 | 10 | - | TSS region | transcription start site region 52132 | |
Tssr52133 | 5 | 14 | - | TSS region | transcription start site region 52133 | |
Tssr52134 | 5 | 10 | - | TSS region | transcription start site region 52134 | |
Tssr47506 | 5 | 11 | + | TSS region | transcription start site region 47506 | |
Tssr47507 | 5 | 11 | + | TSS region | transcription start site region 47507 | |
Tssr47508 | 5 | 1 | + | TSS region | transcription start site region 47508 |