MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 4:99975685-100216851

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Pgm1	4	99929451 to 99987294	57843	+	protein coding gene	phosphoglucomutase 1
Tssr37954	4	99978508 to 99978533	25	+	TSS region	transcription start site region 37954
Tssr37955	4	99983912 to 99983922	10	+	TSS region	transcription start site region 37955
Tssr37956	4	99983985 to 99984011	26	+	TSS region	transcription start site region 37956
Epid1	4	100000000 to 90000000	-10000000		QTL	epididymis and vas deferens weight 1
D4Dcr14	4	100037690 to 100037789	99		DNA segment	DNA Segment, Chr 4, Derry C. Roopenian 14
Tssr42539	4	100042096 to 100042107	11	-	TSS region	transcription start site region 42539
Cpgi14491	4	100042509 to 100042718	209		CpG island	CpG island 14491
D4Dcr15	4	100043986 to 100044081	95		DNA segment	DNA Segment, Chr 4, Derry C. Roopenian 15
Gm12702	4	100052520 to 100065984	13464	+	lincRNA gene	predicted gene 12702
Gm35701	4	100092757 to 100095643	2886	-	lncRNA gene	predicted gene, 35701
Cpgi14492	4	100095685 to 100096851	1166		CpG island	CpG island 14492
Ror1	4	100095791 to 100444765	348974	+	protein coding gene	receptor tyrosine kinase-like orphan receptor 1
Tssr37957	4	100095803 to 100095867	64	+	TSS region	transcription start site region 37957
Tssr37958	4	100095877 to 100095889	12	+	TSS region	transcription start site region 37958
Gm12701	4	100119621 to 100120841	1220	+	sense intronic lncRNA gene	predicted gene 12701
Tssr37959	4	100145075 to 100145081	6	+	TSS region	transcription start site region 37959
Tssr37960	4	100160125 to 100160129	4	+	TSS region	transcription start site region 37960