Gene symbol | Chromo- some |
Coordinates (bp, mm10) | Size (bp) | Strand | Feature Type | Gene name |
---|---|---|---|---|---|---|
Gm12681 | 4 | 14728 | - | lincRNA gene | predicted gene 12681 | |
Cmmm1 | 4 | 0 | QTL | carcinoma modifier of MSM 1 | ||
Tssr37925 | 4 | 13 | + | TSS region | transcription start site region 37925 | |
Cpgi14476 | 4 | 781 | CpG island | CpG island 14476 | ||
Tssr37926 | 4 | 39 | + | TSS region | transcription start site region 37926 | |
Atg4c | 4 | 65853 | + | protein coding gene | autophagy related 4C, cysteine peptidase | |
Tssr37927 | 4 | 80 | + | TSS region | transcription start site region 37927 | |
Tssr37928 | 4 | 14 | + | TSS region | transcription start site region 37928 | |
Tssr37929 | 4 | 11 | + | TSS region | transcription start site region 37929 | |
Tssr42529 | 4 | 6 | - | TSS region | transcription start site region 42529 | |
Tssr37930 | 4 | 33 | + | TSS region | transcription start site region 37930 | |
Cpgi14477 | 4 | 239 | CpG island | CpG island 14477 | ||
Tssr37931 | 4 | 3 | + | TSS region | transcription start site region 37931 | |
Tssr37932 | 4 | 23 | + | TSS region | transcription start site region 37932 | |
Tssr37933 | 4 | 15 | + | TSS region | transcription start site region 37933 | |
Gm10305 | 4 | 2474 | + | unclassified gene | predicted gene 10305 | |
Gm12689 | 4 | 1358 | + | protein coding gene | predicted gene 12689 | |
Gm35379 | 4 | 18279 | + | lncRNA gene | predicted gene, 35379 | |
Gm35537 | 4 | 634 | - | lncRNA gene | predicted gene, 35537 | |
Cpgi14478 | 4 | 275 | CpG island | CpG island 14478 | ||
Spm1 | 4 | 187 | QTL | splenomegaly modifier | ||
D4Mit58 | 4 | 187 | DNA segment | DNA segment, Chr 4, Massachusetts Institute of Technology 58 | ||
Gm37556 | 4 | 9646 | - | unclassified gene | predicted gene, 37556 | |
Gm12685 | 4 | 213 | - | pseudogene | predicted gene 12685 | |
Gm12686 | 4 | 396 | + | pseudogene | predicted gene 12686 | |
Gm12684 | 4 | 998 | - | pseudogene | predicted gene 12684 | |
Cpgi14479 | 4 | 453 | CpG island | CpG island 14479 | ||
Gm12683 | 4 | 414 | - | pseudogene | predicted gene 12683 | |
Gm37117 | 4 | 4730 | + | unclassified gene | predicted gene, 37117 | |
Gm40211 | 4 | 14562 | - | lncRNA gene | predicted gene, 40211 | |
Gm12690 | 4 | 3511 | + | lincRNA gene | predicted gene 12690 | |
Tssr37934 | 4 | 16 | + | TSS region | transcription start site region 37934 | |
Cpgi14480 | 4 | 394 | CpG island | CpG island 14480 | ||
Gm12687 | 4 | 705 | - | pseudogene | predicted gene 12687 | |
Cpgi14481 | 4 | 1345 | CpG island | CpG island 14481 | ||
Tssr37935 | 4 | 17 | + | TSS region | transcription start site region 37935 | |
Cpgi14482 | 4 | 1202 | CpG island | CpG island 14482 | ||
Gm12688 | 4 | 1376 | - | lincRNA gene | predicted gene 12688 | |
Cpgi14483 | 4 | 443 | CpG island | CpG island 14483 | ||
Tssr42530 | 4 | 31 | - | TSS region | transcription start site region 42530 | |
2810439L12Rik | 4 | 295 | unclassified gene | RIKEN cDNA 2810439L12 gene | ||
Cpgi14484 | 4 | 2516 | CpG island | CpG island 14484 | ||
Tssr42531 | 4 | 1 | - | TSS region | transcription start site region 42531 | |
Tssr42532 | 4 | 34 | - | TSS region | transcription start site region 42532 | |
Tssr42533 | 4 | 5 | - | TSS region | transcription start site region 42533 | |
Tssr37936 | 4 | 25 | + | TSS region | transcription start site region 37936 | |
Tssr37937 | 4 | 12 | + | TSS region | transcription start site region 37937 | |
Foxd3 | 4 | 2323 | + | protein coding gene | forkhead box D3 | |
Tssr37938 | 4 | 12 | + | TSS region | transcription start site region 37938 | |
Tssr37939 | 4 | 27 | + | TSS region | transcription start site region 37939 | |
Tssr37940 | 4 | 10 | + | TSS region | transcription start site region 37940 | |
Gm23366 | 4 | 88 | + | miRNA gene | predicted gene, 23366 | |
Cpgi14485 | 4 | 219 | CpG island | CpG island 14485 | ||
Cpgi14486 | 4 | 313 | CpG island | CpG island 14486 | ||
Gm12682 | 4 | 50431 | - | antisense lncRNA gene | predicted gene 12682 | |
Cpgi14487 | 4 | 693 | CpG island | CpG island 14487 | ||
Cpgi14488 | 4 | 859 | CpG island | CpG island 14488 | ||
Tssr37941 | 4 | 15 | + | TSS region | transcription start site region 37941 | |
Tssr37942 | 4 | 42 | + | TSS region | transcription start site region 37942 | |
Alg6 | 4 | 47796 | + | protein coding gene | asparagine-linked glycosylation 6 (alpha-1,3,-glucosyltransferase) | |
Itgb3bp | 4 | 63770 | - | protein coding gene | integrin beta 3 binding protein (beta3-endonexin) | |
Cpgi14489 | 4 | 723 | CpG island | CpG island 14489 | ||
Tssr42534 | 4 | 57 | - | TSS region | transcription start site region 42534 | |
Tssr42535 | 4 | 11 | - | TSS region | transcription start site region 42535 | |
Tssr42536 | 4 | 33 | - | TSS region | transcription start site region 42536 | |
Tssr37943 | 4 | 25 | + | TSS region | transcription start site region 37943 | |
Efcab7 | 4 | 83285 | + | protein coding gene | EF-hand calcium binding domain 7 | |
Tssr37944 | 4 | 6 | + | TSS region | transcription start site region 37944 | |
Gm26425 | 4 | 81 | + | snRNA gene | predicted gene, 26425 | |
Cpgi14490 | 4 | 938 | CpG island | CpG island 14490 | ||
Tssr42537 | 4 | 9 | - | TSS region | transcription start site region 42537 | |
Tssr37945 | 4 | 7 | + | TSS region | transcription start site region 37945 | |
Tssr37946 | 4 | 88 | + | TSS region | transcription start site region 37946 | |
Pgm1 | 4 | 57843 | + | protein coding gene | phosphoglucomutase 1 | |
Tssr37947 | 4 | 11 | + | TSS region | transcription start site region 37947 | |
BC062258 | 4 | 2509 | + | lncRNA gene | cDNA sequence BC062258 | |
Tssr37948 | 4 | 20 | + | TSS region | transcription start site region 37948 | |
Tssr37949 | 4 | 5 | + | TSS region | transcription start site region 37949 | |
Tssr37950 | 4 | 21 | + | TSS region | transcription start site region 37950 | |
Tssr37951 | 4 | 12 | + | TSS region | transcription start site region 37951 | |
Desp6 | 4 | 0 | QTL | despair 6 | ||
Tssr37952 | 4 | 9 | + | TSS region | transcription start site region 37952 | |
Tssr37953 | 4 | 17 | + | TSS region | transcription start site region 37953 | |
Tssr42538 | 4 | 4 | - | TSS region | transcription start site region 42538 | |
Tssr37954 | 4 | 25 | + | TSS region | transcription start site region 37954 | |
Tssr37955 | 4 | 10 | + | TSS region | transcription start site region 37955 | |
Tssr37956 | 4 | 26 | + | TSS region | transcription start site region 37956 | |
Epid1 | 4 | -10000000 | QTL | epididymis and vas deferens weight 1 | ||
D4Dcr14 | 4 | 99 | DNA segment | DNA Segment, Chr 4, Derry C. Roopenian 14 | ||
Tssr42539 | 4 | 11 | - | TSS region | transcription start site region 42539 | |
Cpgi14491 | 4 | 209 | CpG island | CpG island 14491 | ||
D4Dcr15 | 4 | 95 | DNA segment | DNA Segment, Chr 4, Derry C. Roopenian 15 | ||
Gm12702 | 4 | 13464 | + | lincRNA gene | predicted gene 12702 | |
Gm35701 | 4 | 2886 | - | lncRNA gene | predicted gene, 35701 | |
Cpgi14492 | 4 | 1166 | CpG island | CpG island 14492 | ||
Ror1 | 4 | 348974 | + | protein coding gene | receptor tyrosine kinase-like orphan receptor 1 | |
Tssr37957 | 4 | 64 | + | TSS region | transcription start site region 37957 | |
Tssr37958 | 4 | 12 | + | TSS region | transcription start site region 37958 | |
Gm12701 | 4 | 1220 | + | sense intronic lncRNA gene | predicted gene 12701 | |
Tssr37959 | 4 | 6 | + | TSS region | transcription start site region 37959 | |
Tssr37960 | 4 | 4 | + | TSS region | transcription start site region 37960 | |
Tssr37961 | 4 | 1 | + | TSS region | transcription start site region 37961 | |
Tssr37962 | 4 | 5 | + | TSS region | transcription start site region 37962 | |
Tssr37963 | 4 | 3 | + | TSS region | transcription start site region 37963 | |
Gm12706 | 4 | 697 | - | pseudogene | predicted gene 12706 | |
Gm35760 | 4 | 16627 | - | lncRNA gene | predicted gene, 35760 | |
D4Mit175 | 4 | 110 | DNA segment | DNA segment, Chr 4, Massachusetts Institute of Technology 175 | ||
Cpgi14493 | 4 | 504 | CpG island | CpG island 14493 | ||
Gm18288 | 4 | 1267 | + | pseudogene | predicted gene, 18288 | |
Tssr37964 | 4 | 7 | + | TSS region | transcription start site region 37964 | |
Tssr37965 | 4 | 66 | + | TSS region | transcription start site region 37965 | |
Ube2u | 4 | 71278 | + | protein coding gene | ubiquitin-conjugating enzyme E2U (putative) | |
Tssr37966 | 4 | 18 | + | TSS region | transcription start site region 37966 | |
Tssr37967 | 4 | 20 | + | TSS region | transcription start site region 37967 | |
Tssr37968 | 4 | 5 | + | TSS region | transcription start site region 37968 | |
Ube2uos | 4 | 4554 | - | antisense lncRNA gene | ubiquitin-conjugating enzyme E2U (putative), opposite strand | |
Ccdc50-ps | 4 | 940 | - | pseudogene | Ccdc50 retrotransposed pseudogene | |
Cpgi14494 | 4 | 190 | CpG island | CpG island 14494 | ||
Tssr42540 | 4 | 33 | - | TSS region | transcription start site region 42540 | |
Gm12700 | 4 | 456 | + | pseudogene | predicted gene 12700 | |
Gm46888 | 4 | 1339 | - | lncRNA gene | predicted gene, 46888 | |
Idd11 | 4 | 136 | QTL | insulin dependent diabetes susceptibility 11 | ||
D4Mit119 | 4 | 136 | DNA segment | DNA segment, Chr 4, Massachusetts Institute of Technology 119 | ||
Cpgi14495 | 4 | 1762 | CpG island | CpG island 14495 | ||
Tssr37969 | 4 | 15 | + | TSS region | transcription start site region 37969 | |
Tssr37970 | 4 | 28 | + | TSS region | transcription start site region 37970 | |
Cachd1 | 4 | 227070 | + | protein coding gene | cache domain containing 1 | |
Tssr37971 | 4 | 17 | + | TSS region | transcription start site region 37971 | |
Tssr1239 | 4 | 15 | + | TSS region | transcription start site region 1239 | |
Tssr37972 | 4 | 12 | + | TSS region | transcription start site region 37972 | |
Tssr37973 | 4 | 21 | + | TSS region | transcription start site region 37973 | |
Tssr37974 | 4 | 25 | + | TSS region | transcription start site region 37974 | |
Tssr1240 | 4 | 7 | + | TSS region | transcription start site region 1240 | |
Tssr37975 | 4 | 10 | + | TSS region | transcription start site region 37975 | |
Tssr37976 | 4 | 27 | + | TSS region | transcription start site region 37976 | |
D4Mit304 | 4 | 116 | DNA segment | DNA Segment, Chr 4, Massachusetts Institute of Technology 304 | ||
Tssr37977 | 4 | 30 | + | TSS region | transcription start site region 37977 | |
Gm10577 | 4 | 398 | - | protein coding gene | predicted gene 10577 | |
Gm10576 | 4 | 824 | - | protein coding gene | predicted gene 10576 | |
Cpgi14496 | 4 | 1160 | CpG island | CpG island 14496 | ||
Tssr37978 | 4 | 14 | + | TSS region | transcription start site region 37978 | |
Tssr37979 | 4 | 36 | + | TSS region | transcription start site region 37979 | |
Tssr37980 | 4 | 39 | + | TSS region | transcription start site region 37980 | |
Raver2 | 4 | 83332 | + | protein coding gene | ribonucleoprotein, PTB-binding 2 | |
Tssr37981 | 4 | 11 | + | TSS region | transcription start site region 37981 | |
Gm35956 | 4 | 2678 | + | lncRNA gene | predicted gene, 35956 | |
Gm22100 | 4 | 62 | - | snRNA gene | predicted gene, 22100 | |
Jak1 | 4 | 112915 | - | protein coding gene | Janus kinase 1 | |
Tssr42541 | 4 | 3 | - | TSS region | transcription start site region 42541 | |
Tssr42542 | 4 | 2 | - | TSS region | transcription start site region 42542 | |
Tssr42543 | 4 | 14 | - | TSS region | transcription start site region 42543 | |
Tssr42544 | 4 | 1 | - | TSS region | transcription start site region 42544 | |
Tssr42545 | 4 | 8 | - | TSS region | transcription start site region 42545 | |
Tssr37982 | 4 | 4 | + | TSS region | transcription start site region 37982 | |
Gm24468 | 4 | 103 | + | snRNA gene | predicted gene, 24468 | |
Tssr37983 | 4 | 5 | + | TSS region | transcription start site region 37983 | |
Gm12785 | 4 | 171 | - | pseudogene | predicted gene 12785 | |
Tssr37984 | 4 | 35 | + | TSS region | transcription start site region 37984 | |
Gm19063 | 4 | 516 | + | pseudogene | predicted gene, 19063 | |
Tssr42546 | 4 | 4 | - | TSS region | transcription start site region 42546 | |
D4Mit305 | 4 | 109 | DNA segment | DNA Segment, Chr 4, Massachusetts Institute of Technology 305 | ||
Cpgi14497 | 4 | 1255 | CpG island | CpG island 14497 | ||
Tssr42547 | 4 | 22 | - | TSS region | transcription start site region 42547 | |
Tssr42548 | 4 | 17 | - | TSS region | transcription start site region 42548 | |
Tssr42549 | 4 | 18 | - | TSS region | transcription start site region 42549 | |
Gm25124 | 4 | 163 | + | snRNA gene | predicted gene, 25124 | |
Gm12801 | 4 | 982 | + | lincRNA gene | predicted gene 12801 | |
Cpgi14498 | 4 | 1555 | CpG island | CpG island 14498 | ||
Tssr37985 | 4 | 29 | + | TSS region | transcription start site region 37985 | |
Tssr37986 | 4 | 10 | + | TSS region | transcription start site region 37986 | |
Tssr37987 | 4 | 10 | + | TSS region | transcription start site region 37987 | |
Gm12796 | 4 | 29331 | - | lincRNA gene | predicted gene 12796 | |
Tssr42550 | 4 | 48 | - | TSS region | transcription start site region 42550 | |
Gm12793 | 4 | 291 | + | pseudogene | predicted gene 12793 | |
E130102H24Rik | 4 | 9724 | - | lincRNA gene | RIKEN cDNA E130102H24 gene | |
Tssr42551 | 4 | 15 | - | TSS region | transcription start site region 42551 | |
Mir101a | 4 | 82 | - | miRNA gene | microRNA 101a | |
D4Mit277 | 4 | 98 | DNA segment | DNA segment, Chr 4, Massachusetts Institute of Technology 277 | ||
0610043K17Rik | 4 | 45398 | + | lincRNA gene | RIKEN cDNA 0610043K17 gene | |
Tssr42552 | 4 | 6 | - | TSS region | transcription start site region 42552 | |
Cpgi14499 | 4 | 1660 | CpG island | CpG island 14499 | ||
Tssr37988 | 4 | 23 | + | TSS region | transcription start site region 37988 | |
Tssr42553 | 4 | 44 | - | TSS region | transcription start site region 42553 | |
Tssr42554 | 4 | 67 | - | TSS region | transcription start site region 42554 | |
Tssr42555 | 4 | 144 | - | TSS region | transcription start site region 42555 | |
Tssr42556 | 4 | 11 | - | TSS region | transcription start site region 42556 | |
Tssr42557 | 4 | 24 | - | TSS region | transcription start site region 42557 | |
Tssr42558 | 4 | 19 | - | TSS region | transcription start site region 42558 | |
Tssr42559 | 4 | 2 | - | TSS region | transcription start site region 42559 | |
Gm12795 | 4 | 713 | - | pseudogene | predicted gene 12795 | |
Tssr42560 | 4 | 18 | - | TSS region | transcription start site region 42560 | |
Tssr42561 | 4 | 12 | - | TSS region | transcription start site region 42561 | |
Gm12798 | 4 | 4775 | + | lincRNA gene | predicted gene 12798 | |
Cpgi14500 | 4 | 1658 | CpG island | CpG island 14500 | ||
Ak4 | 4 | 47718 | + | protein coding gene | adenylate kinase 4 | |
Tssr37989 | 4 | 31 | + | TSS region | transcription start site region 37989 | |
Tssr37990 | 4 | 14 | + | TSS region | transcription start site region 37990 | |
Tssr37991 | 4 | 19 | + | TSS region | transcription start site region 37991 | |
Tssr37992 | 4 | 36 | + | TSS region | transcription start site region 37992 | |
Tssr37993 | 4 | 43 | + | TSS region | transcription start site region 37993 |