Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:98737928-99107937

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40 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
L1td1 4 98726754 to 98738486 11732 + protein coding gene LINE-1 type transposase domain containing 1
Gm17376 4 98745735 to 98745822 87 + pseudogene predicted gene, 17376
Kank4 4 98754898 to 98817537 62639 - protein coding gene KN motif and ankyrin repeat domains 4
Kank4os 4 98793768 to 98798900 5132 + antisense lncRNA gene KN motif and ankyrin repeat domains 4, opposite strand
Cpgi14473 4 98816864 to 98818112 1248 CpG island CpG island 14473
Tssr42517 4 98817687 to 98817706 19 - TSS region transcription start site region 42517
I0C0044D17Rik 4 98818475 to 98823840 5365 - protein coding gene RIKEN cDNA I0C0044D17 gene
Gm12851 4 98855614 to 98856034 420 + pseudogene predicted gene 12851
Cpgi14474 4 98922742 to 98924872 2130 CpG island CpG island 14474
Tssr37901 4 98922928 to 98922937 9 + TSS region transcription start site region 37901
Tssr37902 4 98923659 to 98923676 17 + TSS region transcription start site region 37902
Tssr37903 4 98923724 to 98923743 19 + TSS region transcription start site region 37903
Tssr37904 4 98923751 to 98923777 26 + TSS region transcription start site region 37904
Usp1 4 98923810 to 98935543 11733 + protein coding gene ubiquitin specific peptidase 1
Tssr37905 4 98923815 to 98923842 27 + TSS region transcription start site region 37905
Tssr37906 4 98923845 to 98923893 48 + TSS region transcription start site region 37906
Tssr37907 4 98923908 to 98923976 68 + TSS region transcription start site region 37907
Dock7 4 98936671 to 99120915 184244 - protein coding gene dedicator of cytokinesis 7
Tssr37908 4 98978709 to 98978734 25 + TSS region transcription start site region 37908
Tssr42518 4 98999975 to 98999981 6 - TSS region transcription start site region 42518
Tssr42519 4 99030815 to 99030826 11 - TSS region transcription start site region 42519
Tssr37909 4 99030878 to 99030883 5 + TSS region transcription start site region 37909
Tssr37910 4 99030907 to 99030944 37 + TSS region transcription start site region 37910
Tssr37911 4 99030946 to 99030961 15 + TSS region transcription start site region 37911
Angptl3 4 99030954 to 99038192 7238 + protein coding gene angiopoietin-like 3
Tssr37912 4 99031161 to 99031172 11 + TSS region transcription start site region 37912
Tssr37913 4 99031196 to 99031208 12 + TSS region transcription start site region 37913
Tssr37914 4 99031286 to 99031303 17 + TSS region transcription start site region 37914
Tssr37915 4 99031336 to 99031347 11 + TSS region transcription start site region 37915
Tssr37916 4 99031417 to 99031437 20 + TSS region transcription start site region 37916
Tssr37917 4 99031462 to 99031474 12 + TSS region transcription start site region 37917
Tssr37918 4 99033231 to 99033243 12 + TSS region transcription start site region 37918
Tssr37919 4 99037380 to 99037394 14 + TSS region transcription start site region 37919
Tssr37920 4 99037462 to 99037478 16 + TSS region transcription start site region 37920
Tssr37921 4 99037491 to 99037503 12 + TSS region transcription start site region 37921
Tssr37922 4 99037535 to 99037544 9 + TSS region transcription start site region 37922
Tssr37923 4 99037548 to 99037559 11 + TSS region transcription start site region 37923
Tssr37924 4 99037893 to 99037897 4 + TSS region transcription start site region 37924
Gm12852 4 99103060 to 99103778 718 - pseudogene predicted gene 12852
Tssr42520 4 99103796 to 99103833 37 - TSS region transcription start site region 42520