MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 4:98723475-98918840

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Cpgi14471	4	98726536 to 98727597	1061		CpG island	CpG island 14471
Tssr42514	4	98726611 to 98726661	50	-	TSS region	transcription start site region 42514
Tssr37896	4	98726744 to 98726766	22	+	TSS region	transcription start site region 37896
L1td1	4	98726754 to 98738486	11732	+	protein coding gene	LINE-1 type transposase domain containing 1
Tssr37897	4	98726773 to 98726783	10	+	TSS region	transcription start site region 37897
Tssr37898	4	98726786 to 98726805	19	+	TSS region	transcription start site region 37898
Tssr42515	4	98727965 to 98727978	13	-	TSS region	transcription start site region 42515
Tssr37899	4	98728358 to 98728373	15	+	TSS region	transcription start site region 37899
Tssr42516	4	98733522 to 98733533	11	-	TSS region	transcription start site region 42516
Cpgi14472	4	98733764 to 98734071	307		CpG island	CpG island 14472
Tssr37900	4	98733949 to 98733952	3	+	TSS region	transcription start site region 37900
Gm17376	4	98745735 to 98745822	87	+	pseudogene	predicted gene, 17376
Kank4	4	98754898 to 98817537	62639	-	protein coding gene	KN motif and ankyrin repeat domains 4
Kank4os	4	98793768 to 98798900	5132	+	antisense lncRNA gene	KN motif and ankyrin repeat domains 4, opposite strand
Cpgi14473	4	98816864 to 98818112	1248		CpG island	CpG island 14473
Tssr42517	4	98817687 to 98817706	19	-	TSS region	transcription start site region 42517
I0C0044D17Rik	4	98818475 to 98823840	5365	-	protein coding gene	RIKEN cDNA I0C0044D17 gene
Gm12851	4	98855614 to 98856034	420	+	pseudogene	predicted gene 12851