Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:98718475-98923840

Filter by:
26 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Patj 4 98395785 to 98719603 323818 + protein coding gene PATJ, crumbs cell polarity complex component
Cpgi14471 4 98726536 to 98727597 1061 CpG island CpG island 14471
Tssr42514 4 98726611 to 98726661 50 - TSS region transcription start site region 42514
Tssr37896 4 98726744 to 98726766 22 + TSS region transcription start site region 37896
L1td1 4 98726754 to 98738486 11732 + protein coding gene LINE-1 type transposase domain containing 1
Tssr37897 4 98726773 to 98726783 10 + TSS region transcription start site region 37897
Tssr37898 4 98726786 to 98726805 19 + TSS region transcription start site region 37898
Tssr42515 4 98727965 to 98727978 13 - TSS region transcription start site region 42515
Tssr37899 4 98728358 to 98728373 15 + TSS region transcription start site region 37899
Tssr42516 4 98733522 to 98733533 11 - TSS region transcription start site region 42516
Cpgi14472 4 98733764 to 98734071 307 CpG island CpG island 14472
Tssr37900 4 98733949 to 98733952 3 + TSS region transcription start site region 37900
Gm17376 4 98745735 to 98745822 87 + pseudogene predicted gene, 17376
Kank4 4 98754898 to 98817537 62639 - protein coding gene KN motif and ankyrin repeat domains 4
Kank4os 4 98793768 to 98798900 5132 + antisense lncRNA gene KN motif and ankyrin repeat domains 4, opposite strand
Cpgi14473 4 98816864 to 98818112 1248 CpG island CpG island 14473
Tssr42517 4 98817687 to 98817706 19 - TSS region transcription start site region 42517
I0C0044D17Rik 4 98818475 to 98823840 5365 - protein coding gene RIKEN cDNA I0C0044D17 gene
Gm12851 4 98855614 to 98856034 420 + pseudogene predicted gene 12851
Cpgi14474 4 98922742 to 98924872 2130 CpG island CpG island 14474
Tssr37901 4 98922928 to 98922937 9 + TSS region transcription start site region 37901
Tssr37902 4 98923659 to 98923676 17 + TSS region transcription start site region 37902
Tssr37903 4 98923724 to 98923743 19 + TSS region transcription start site region 37903
Tssr37904 4 98923751 to 98923777 26 + TSS region transcription start site region 37904
Usp1 4 98923810 to 98935543 11733 + protein coding gene ubiquitin specific peptidase 1
Tssr37905 4 98923815 to 98923842 27 + TSS region transcription start site region 37905