Gene symbol |
Chromo- some |
Coordinates (bp, mm10) |
Size (bp) |
Strand |
Feature Type |
Gene name |
---|---|---|---|---|---|---|
Nfia | 4 | 346140 | + | protein coding gene | nuclear factor I/A | |
Tssr37870 | 4 | 5 | + | TSS region | transcription start site region 37870 | |
Tssr37871 | 4 | 6 | + | TSS region | transcription start site region 37871 | |
Tssr37872 | 4 | 20 | + | TSS region | transcription start site region 37872 | |
Tssr37873 | 4 | 17 | + | TSS region | transcription start site region 37873 | |
Tssr37874 | 4 | 4 | + | TSS region | transcription start site region 37874 | |
Gm34784 | 4 | 5619 | + | lncRNA gene | predicted gene, 34784 | |
Gm12691 | 4 | 4196 | - | pseudogene | predicted gene 12691 | |
D4Mit303 | 4 | 120 | DNA segment | DNA Segment, Chr 4, Massachusetts Institute of Technology 303 | ||
Gm12692 | 4 | 544 | - | pseudogene | predicted gene 12692 | |
Tssr42508 | 4 | 20 | - | TSS region | transcription start site region 42508 | |
Gm12787 | 4 | 492 | - | pseudogene | predicted gene 12787 | |
Gm24203 | 4 | 113 | + | unclassified non-coding RNA gene | predicted gene, 24203 | |
0610025J13Rik | 4 | 10393 | + | antisense lncRNA gene | RIKEN cDNA 0610025J13 gene | |
Cpgi14468 | 4 | 691 | CpG island | CpG island 14468 | ||
Edlmmq3 | 4 | 0 | QTL | extensor digitorum longus muscle mass QTL 3 | ||
Gm12788 | 4 | 307 | + | pseudogene | predicted gene 12788 | |
Tm2d1 | 4 | 27909 | - | protein coding gene | TM2 domain containing 1 | |
Cpgi14469 | 4 | 619 | CpG island | CpG island 14469 | ||
Tssr42509 | 4 | 48 | - | TSS region | transcription start site region 42509 | |
Gm24960 | 4 | 89 | - | snRNA gene | predicted gene, 24960 | |
Cpgi14470 | 4 | 909 | CpG island | CpG island 14470 | ||
Tssr37875 | 4 | 28 | + | TSS region | transcription start site region 37875 | |
Patj | 4 | 323818 | + | protein coding gene | PATJ, crumbs cell polarity complex component | |
Tssr37876 | 4 | 71 | + | TSS region | transcription start site region 37876 | |
Tssr37877 | 4 | 17 | + | TSS region | transcription start site region 37877 | |
Tssr37878 | 4 | 30 | + | TSS region | transcription start site region 37878 | |
Tssr37879 | 4 | 16 | + | TSS region | transcription start site region 37879 | |
Tssr37880 | 4 | 18 | + | TSS region | transcription start site region 37880 | |
Tssr37881 | 4 | 54 | + | TSS region | transcription start site region 37881 | |
Tssr37882 | 4 | 7 | + | TSS region | transcription start site region 37882 | |
Tssr37883 | 4 | 50 | + | TSS region | transcription start site region 37883 | |
Tssr37884 | 4 | 7 | + | TSS region | transcription start site region 37884 | |
Tssr37885 | 4 | 24 | + | TSS region | transcription start site region 37885 | |
Tssr37886 | 4 | 2 | + | TSS region | transcription start site region 37886 | |
Tssr1238 | 4 | 10 | + | TSS region | transcription start site region 1238 | |
Tssr37887 | 4 | 24 | + | TSS region | transcription start site region 37887 | |
Tssr37888 | 4 | 27 | + | TSS region | transcription start site region 37888 | |
Tssr37889 | 4 | 13 | + | TSS region | transcription start site region 37889 | |
Tssr37890 | 4 | 29 | + | TSS region | transcription start site region 37890 | |
Tssr37891 | 4 | 17 | + | TSS region | transcription start site region 37891 | |
Tssr37892 | 4 | 8 | + | TSS region | transcription start site region 37892 | |
Tssr37893 | 4 | 12 | + | TSS region | transcription start site region 37893 | |
Tssr37894 | 4 | 40 | + | TSS region | transcription start site region 37894 | |
Tssr37895 | 4 | 39 | + | TSS region | transcription start site region 37895 | |
Gm22625 | 4 | 125 | - | miRNA gene | predicted gene, 22625 | |
Gm40210 | 4 | 8482 | + | lncRNA gene | predicted gene, 40210 | |
D4Mit28 | 4 | 140 | DNA segment | DNA segment, Chr 4, Massachusetts Institute of Technology 28 | ||
Gm26154 | 4 | 95 | + | miRNA gene | predicted gene, 26154 | |
Gm12846 | 4 | 1769 | + | pseudogene | predicted gene 12846 | |
Gm35137 | 4 | 2888 | - | lncRNA gene | predicted gene, 35137 | |
Tssr42510 | 4 | 10 | - | TSS region | transcription start site region 42510 | |
Tssr42511 | 4 | 13 | - | TSS region | transcription start site region 42511 | |
Tssr42512 | 4 | 11 | - | TSS region | transcription start site region 42512 | |
Gm35073 | 4 | 310 | - | lncRNA gene | predicted gene, 35073 | |
Tssr42513 | 4 | 23 | - | TSS region | transcription start site region 42513 | |
D4Mit246 | 4 | 95 | DNA segment | DNA segment, Chr 4, Massachusetts Institute of Technology 246 | ||
Cpgi14471 | 4 | 1061 | CpG island | CpG island 14471 | ||
Tssr42514 | 4 | 50 | - | TSS region | transcription start site region 42514 | |
Tssr37896 | 4 | 22 | + | TSS region | transcription start site region 37896 | |
L1td1 | 4 | 11732 | + | protein coding gene | LINE-1 type transposase domain containing 1 | |
Tssr37897 | 4 | 10 | + | TSS region | transcription start site region 37897 | |
Tssr37898 | 4 | 19 | + | TSS region | transcription start site region 37898 | |
Tssr42515 | 4 | 13 | - | TSS region | transcription start site region 42515 | |
Tssr37899 | 4 | 15 | + | TSS region | transcription start site region 37899 | |
Tssr42516 | 4 | 11 | - | TSS region | transcription start site region 42516 | |
Cpgi14472 | 4 | 307 | CpG island | CpG island 14472 | ||
Tssr37900 | 4 | 3 | + | TSS region | transcription start site region 37900 | |
Gm17376 | 4 | 87 | + | pseudogene | predicted gene, 17376 | |
Kank4 | 4 | 62639 | - | protein coding gene | KN motif and ankyrin repeat domains 4 | |
Kank4os | 4 | 5132 | + | antisense lncRNA gene | KN motif and ankyrin repeat domains 4, opposite strand | |
Cpgi14473 | 4 | 1248 | CpG island | CpG island 14473 | ||
Tssr42517 | 4 | 19 | - | TSS region | transcription start site region 42517 | |
I0C0044D17Rik | 4 | 5365 | - | protein coding gene | RIKEN cDNA I0C0044D17 gene | |
Gm12851 | 4 | 420 | + | pseudogene | predicted gene 12851 | |
Cpgi14474 | 4 | 2130 | CpG island | CpG island 14474 | ||
Tssr37901 | 4 | 9 | + | TSS region | transcription start site region 37901 | |
Tssr37902 | 4 | 17 | + | TSS region | transcription start site region 37902 | |
Tssr37903 | 4 | 19 | + | TSS region | transcription start site region 37903 | |
Tssr37904 | 4 | 26 | + | TSS region | transcription start site region 37904 | |
Usp1 | 4 | 11733 | + | protein coding gene | ubiquitin specific peptidase 1 | |
Tssr37905 | 4 | 27 | + | TSS region | transcription start site region 37905 | |
Tssr37906 | 4 | 48 | + | TSS region | transcription start site region 37906 | |
Tssr37907 | 4 | 68 | + | TSS region | transcription start site region 37907 | |
Dock7 | 4 | 184244 | - | protein coding gene | dedicator of cytokinesis 7 | |
Tssr37908 | 4 | 25 | + | TSS region | transcription start site region 37908 | |
Tssr42518 | 4 | 6 | - | TSS region | transcription start site region 42518 | |
Tssr42519 | 4 | 11 | - | TSS region | transcription start site region 42519 | |
Tssr37909 | 4 | 5 | + | TSS region | transcription start site region 37909 | |
Tssr37910 | 4 | 37 | + | TSS region | transcription start site region 37910 | |
Tssr37911 | 4 | 15 | + | TSS region | transcription start site region 37911 | |
Angptl3 | 4 | 7238 | + | protein coding gene | angiopoietin-like 3 | |
Tssr37912 | 4 | 11 | + | TSS region | transcription start site region 37912 | |
Tssr37913 | 4 | 12 | + | TSS region | transcription start site region 37913 | |
Tssr37914 | 4 | 17 | + | TSS region | transcription start site region 37914 | |
Tssr37915 | 4 | 11 | + | TSS region | transcription start site region 37915 | |
Tssr37916 | 4 | 20 | + | TSS region | transcription start site region 37916 | |
Tssr37917 | 4 | 12 | + | TSS region | transcription start site region 37917 | |
Tssr37918 | 4 | 12 | + | TSS region | transcription start site region 37918 | |
Tssr37919 | 4 | 14 | + | TSS region | transcription start site region 37919 | |
Tssr37920 | 4 | 16 | + | TSS region | transcription start site region 37920 | |
Tssr37921 | 4 | 12 | + | TSS region | transcription start site region 37921 | |
Tssr37922 | 4 | 9 | + | TSS region | transcription start site region 37922 | |
Tssr37923 | 4 | 11 | + | TSS region | transcription start site region 37923 | |
Tssr37924 | 4 | 4 | + | TSS region | transcription start site region 37924 | |
Gm12852 | 4 | 718 | - | pseudogene | predicted gene 12852 | |
Tssr42520 | 4 | 37 | - | TSS region | transcription start site region 42520 | |
Gm12705 | 4 | 1887 | + | antisense lncRNA gene | predicted gene 12705 | |
Cpgi14475 | 4 | 1146 | CpG island | CpG island 14475 | ||
Tssr42521 | 4 | 17 | - | TSS region | transcription start site region 42521 | |
Tssr42522 | 4 | 38 | - | TSS region | transcription start site region 42522 | |
Tssr42523 | 4 | 37 | - | TSS region | transcription start site region 42523 | |
Tssr42524 | 4 | 16 | - | TSS region | transcription start site region 42524 | |
Tssr42525 | 4 | 9 | - | TSS region | transcription start site region 42525 | |
Tssr42526 | 4 | 11 | - | TSS region | transcription start site region 42526 | |
Tssr42527 | 4 | 12 | - | TSS region | transcription start site region 42527 | |
Tssr42528 | 4 | 12 | - | TSS region | transcription start site region 42528 | |
Gm12681 | 4 | 14728 | - | lincRNA gene | predicted gene 12681 | |
Cmmm1 | 4 | 0 | QTL | carcinoma modifier of MSM 1 | ||
Tssr37925 | 4 | 13 | + | TSS region | transcription start site region 37925 | |
Cpgi14476 | 4 | 781 | CpG island | CpG island 14476 | ||
Tssr37926 | 4 | 39 | + | TSS region | transcription start site region 37926 | |
Atg4c | 4 | 65853 | + | protein coding gene | autophagy related 4C, cysteine peptidase | |
Tssr37927 | 4 | 80 | + | TSS region | transcription start site region 37927 | |
Tssr37928 | 4 | 14 | + | TSS region | transcription start site region 37928 | |
Tssr37929 | 4 | 11 | + | TSS region | transcription start site region 37929 | |
Tssr42529 | 4 | 6 | - | TSS region | transcription start site region 42529 | |
Tssr37930 | 4 | 33 | + | TSS region | transcription start site region 37930 | |
Cpgi14477 | 4 | 239 | CpG island | CpG island 14477 | ||
Tssr37931 | 4 | 3 | + | TSS region | transcription start site region 37931 | |
Tssr37932 | 4 | 23 | + | TSS region | transcription start site region 37932 | |
Tssr37933 | 4 | 15 | + | TSS region | transcription start site region 37933 | |
Gm10305 | 4 | 2474 | + | unclassified gene | predicted gene 10305 | |
Gm12689 | 4 | 1358 | + | protein coding gene | predicted gene 12689 | |
Gm35379 | 4 | 18279 | + | lncRNA gene | predicted gene, 35379 | |
Gm35537 | 4 | 634 | - | lncRNA gene | predicted gene, 35537 | |
Cpgi14478 | 4 | 275 | CpG island | CpG island 14478 | ||
Spm1 | 4 | 187 | QTL | splenomegaly modifier | ||
D4Mit58 | 4 | 187 | DNA segment | DNA segment, Chr 4, Massachusetts Institute of Technology 58 | ||
Gm37556 | 4 | 9646 | - | unclassified gene | predicted gene, 37556 | |
Gm12685 | 4 | 213 | - | pseudogene | predicted gene 12685 | |
Gm12686 | 4 | 396 | + | pseudogene | predicted gene 12686 | |
Gm12684 | 4 | 998 | - | pseudogene | predicted gene 12684 | |
Cpgi14479 | 4 | 453 | CpG island | CpG island 14479 | ||
Gm12683 | 4 | 414 | - | pseudogene | predicted gene 12683 | |
Gm37117 | 4 | 4730 | + | unclassified gene | predicted gene, 37117 | |
Gm40211 | 4 | 14562 | - | lncRNA gene | predicted gene, 40211 | |
Gm12690 | 4 | 3511 | + | lincRNA gene | predicted gene 12690 | |
Tssr37934 | 4 | 16 | + | TSS region | transcription start site region 37934 | |
Cpgi14480 | 4 | 394 | CpG island | CpG island 14480 | ||
Gm12687 | 4 | 705 | - | pseudogene | predicted gene 12687 | |
Cpgi14481 | 4 | 1345 | CpG island | CpG island 14481 | ||
Tssr37935 | 4 | 17 | + | TSS region | transcription start site region 37935 | |
Cpgi14482 | 4 | 1202 | CpG island | CpG island 14482 | ||
Gm12688 | 4 | 1376 | - | lincRNA gene | predicted gene 12688 | |
Cpgi14483 | 4 | 443 | CpG island | CpG island 14483 | ||
Tssr42530 | 4 | 31 | - | TSS region | transcription start site region 42530 | |
2810439L12Rik | 4 | 295 | unclassified gene | RIKEN cDNA 2810439L12 gene | ||
Cpgi14484 | 4 | 2516 | CpG island | CpG island 14484 | ||
Tssr42531 | 4 | 1 | - | TSS region | transcription start site region 42531 | |
Tssr42532 | 4 | 34 | - | TSS region | transcription start site region 42532 | |
Tssr42533 | 4 | 5 | - | TSS region | transcription start site region 42533 | |
Tssr37936 | 4 | 25 | + | TSS region | transcription start site region 37936 | |
Tssr37937 | 4 | 12 | + | TSS region | transcription start site region 37937 | |
Foxd3 | 4 | 2323 | + | protein coding gene | forkhead box D3 | |
Tssr37938 | 4 | 12 | + | TSS region | transcription start site region 37938 | |
Tssr37939 | 4 | 27 | + | TSS region | transcription start site region 37939 | |
Tssr37940 | 4 | 10 | + | TSS region | transcription start site region 37940 | |
Gm23366 | 4 | 88 | + | miRNA gene | predicted gene, 23366 | |
Cpgi14485 | 4 | 219 | CpG island | CpG island 14485 | ||
Cpgi14486 | 4 | 313 | CpG island | CpG island 14486 | ||
Gm12682 | 4 | 50431 | - | antisense lncRNA gene | predicted gene 12682 | |
Cpgi14487 | 4 | 693 | CpG island | CpG island 14487 | ||
Cpgi14488 | 4 | 859 | CpG island | CpG island 14488 | ||
Tssr37941 | 4 | 15 | + | TSS region | transcription start site region 37941 | |
Tssr37942 | 4 | 42 | + | TSS region | transcription start site region 37942 | |
Alg6 | 4 | 47796 | + | protein coding gene | asparagine-linked glycosylation 6 (alpha-1,3,-glucosyltransferase) | |
Itgb3bp | 4 | 63770 | - | protein coding gene | integrin beta 3 binding protein (beta3-endonexin) | |
Cpgi14489 | 4 | 723 | CpG island | CpG island 14489 | ||
Tssr42534 | 4 | 57 | - | TSS region | transcription start site region 42534 | |
Tssr42535 | 4 | 11 | - | TSS region | transcription start site region 42535 | |
Tssr42536 | 4 | 33 | - | TSS region | transcription start site region 42536 | |
Tssr37943 | 4 | 25 | + | TSS region | transcription start site region 37943 | |
Efcab7 | 4 | 83285 | + | protein coding gene | EF-hand calcium binding domain 7 | |
Tssr37944 | 4 | 6 | + | TSS region | transcription start site region 37944 | |
Gm26425 | 4 | 81 | + | snRNA gene | predicted gene, 26425 | |
Cpgi14490 | 4 | 938 | CpG island | CpG island 14490 | ||
Tssr42537 | 4 | 9 | - | TSS region | transcription start site region 42537 | |
Tssr37945 | 4 | 7 | + | TSS region | transcription start site region 37945 | |
Tssr37946 | 4 | 88 | + | TSS region | transcription start site region 37946 | |
Pgm1 | 4 | 57843 | + | protein coding gene | phosphoglucomutase 1 | |
Tssr37947 | 4 | 11 | + | TSS region | transcription start site region 37947 | |
BC062258 | 4 | 2509 | + | lncRNA gene | cDNA sequence BC062258 | |
Tssr37948 | 4 | 20 | + | TSS region | transcription start site region 37948 | |
Tssr37949 | 4 | 5 | + | TSS region | transcription start site region 37949 | |
Tssr37950 | 4 | 21 | + | TSS region | transcription start site region 37950 | |
Tssr37951 | 4 | 12 | + | TSS region | transcription start site region 37951 | |
Desp6 | 4 | 0 | QTL | despair 6 | ||
Tssr37952 | 4 | 9 | + | TSS region | transcription start site region 37952 | |
Tssr37953 | 4 | 17 | + | TSS region | transcription start site region 37953 |