Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:97778062-98268101

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30 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Nfia 4 97772734 to 98118874 346140 + protein coding gene nuclear factor I/A
Cpgi14464 4 97776874 to 97778954 2080 CpG island CpG island 14464
Tssr42506 4 97778042 to 97778071 29 - TSS region transcription start site region 42506
Tssr37863 4 97778126 to 97778136 10 + TSS region transcription start site region 37863
Tssr37864 4 97830235 to 97830240 5 + TSS region transcription start site region 37864
Tssr37865 4 97860114 to 97860176 62 + TSS region transcription start site region 37865
Gm19417 4 97862410 to 97869231 6821 - lncRNA gene predicted gene, 19417
Cpgi14465 4 97868816 to 97869166 350 CpG island CpG island 14465
D4Ertd681e 4 97891146 to 97891389 243 DNA segment DNA segment, Chr 4, ERATO Doi 681, expressed
Tssr37866 4 97906153 to 97906192 39 + TSS region transcription start site region 37866
Cpgi14466 4 97910761 to 97911118 357 CpG island CpG island 14466
Gm40208 4 97930425 to 97940987 10562 + lncRNA gene predicted gene, 40208
Tssr37867 4 97930433 to 97930437 4 + TSS region transcription start site region 37867
Gm34218 4 98018556 to 98024773 6217 - lncRNA gene predicted gene, 34218
Tssr42507 4 98023062 to 98023101 39 - TSS region transcription start site region 42507
Tssr37868 4 98041581 to 98041610 29 + TSS region transcription start site region 37868
Tssr37869 4 98063072 to 98063084 12 + TSS region transcription start site region 37869
D4Ertd513e 4 98072545 to 98072774 229 DNA segment DNA segment, Chr 4, ERATO Doi 513, expressed
Cpgi14467 4 98102669 to 98102950 281 CpG island CpG island 14467
Tssr37870 4 98111475 to 98111480 5 + TSS region transcription start site region 37870
Tssr37871 4 98112024 to 98112030 6 + TSS region transcription start site region 37871
Tssr37872 4 98113349 to 98113369 20 + TSS region transcription start site region 37872
Tssr37873 4 98113707 to 98113724 17 + TSS region transcription start site region 37873
Tssr37874 4 98114831 to 98114835 4 + TSS region transcription start site region 37874
Gm34784 4 98125654 to 98131273 5619 + lncRNA gene predicted gene, 34784
Gm12691 4 98146065 to 98150261 4196 - pseudogene predicted gene 12691
D4Mit303 4 98210228 to 98210348 120 DNA segment DNA Segment, Chr 4, Massachusetts Institute of Technology 303
Gm12692 4 98234745 to 98235289 544 - pseudogene predicted gene 12692
Tssr42508 4 98235367 to 98235387 20 - TSS region transcription start site region 42508
Gm12787 4 98268083 to 98268575 492 - pseudogene predicted gene 12787