Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:95689715-96237655

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28 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Fggy 4 95557507 to 95926939 369432 + protein coding gene FGGY carbohydrate kinase domain containing
Tssr37830 4 95738372 to 95738400 28 + TSS region transcription start site region 37830
Tssr37831 4 95738409 to 95738424 15 + TSS region transcription start site region 37831
Tssr42464 4 95741236 to 95741240 4 - TSS region transcription start site region 42464
Tssr37832 4 95850760 to 95850765 5 + TSS region transcription start site region 37832
Tssr1235 4 95934126 to 95934133 7 - TSS region transcription start site region 1235
Tssr37833 4 95947146 to 95947155 9 + TSS region transcription start site region 37833
9530080O11Rik 4 95959715 to 95967655 7940 - lncRNA gene RIKEN cDNA 9530080O11 gene
Cpgi14458 4 95966843 to 95967931 1088 CpG island CpG island 14458
Tssr42465 4 95967005 to 95967017 12 - TSS region transcription start site region 42465
Tssr37834 4 95967117 to 95967145 28 + TSS region transcription start site region 37834
Tssr37835 4 95967205 to 95967320 115 + TSS region transcription start site region 37835
Hook1 4 95967240 to 96025413 58173 + protein coding gene hook microtubule tethering protein 1
Tssr37836 4 95967322 to 95967381 59 + TSS region transcription start site region 37836
Tssr37837 4 95967384 to 95967403 19 + TSS region transcription start site region 37837
Tssr37838 4 95967405 to 95967426 21 + TSS region transcription start site region 37838
Tssr37839 4 95969919 to 95969928 9 + TSS region transcription start site region 37839
Tssr37840 4 95969950 to 95969959 9 + TSS region transcription start site region 37840
2900072D07Rik 4 96029758 to 96030748 990 unclassified gene RIKEN cDNA 2900072D07 gene
Cyp2j13 4 96042660 to 96077566 34906 - protein coding gene cytochrome P450, family 2, subfamily j, polypeptide 13
Hspe1-ps6 4 96072424 to 96072706 282 - pseudogene heat shock protein 1 (chaperonin 10), pseudogene 6
Tssr42466 4 96077509 to 96077547 38 - TSS region transcription start site region 42466
Cyp2j12 4 96099318 to 96141152 41834 - protein coding gene cytochrome P450, family 2, subfamily j, polypeptide 12
Tssr42467 4 96141149 to 96141158 9 - TSS region transcription start site region 42467
Cyp2j7-ps3 4 96151653 to 96151858 205 - pseudogene cytochrome P450, family 2, subfamily j, polypeptide 7, pseudogene 3
Cyp2j7-ps2 4 96170207 to 96170385 178 - pseudogene cytochrome P450, family 2, subfamily j, polypeptide 7, pseudogene 2
Cyp2j7-ps1 4 96190071 to 96190243 172 - pseudogene cytochrome P450, family 2, subfamily j, polypeptide 7, pseudogene 1
Cyp2j7 4 96195197 to 96236659 41462 - protein coding gene cytochrome P450, family 2, subfamily j, polypeptide 7