Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:95099446-96059462

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51 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Junos 4 95051534 to 95167318 115784 + antisense lncRNA gene jun proto-oncogene, opposite strand
Tssr37818 4 95104343 to 95104345 2 + TSS region transcription start site region 37818
Gm28096 4 95151740 to 95157503 5763 + sense intronic lncRNA gene predicted gene 28096
Cpgi14457 4 95160939 to 95161817 878 CpG island CpG island 14457
Tssr37819 4 95161463 to 95161490 27 + TSS region transcription start site region 37819
Tssr37820 4 95161513 to 95161522 9 + TSS region transcription start site region 37820
Tssr1233 4 95193292 to 95193326 34 + TSS region transcription start site region 1233
Gm12708 4 95193313 to 95209727 16414 + lincRNA gene predicted gene 12708
Gm32240 4 95196913 to 95208085 11172 - lncRNA gene predicted gene, 32240
Tssr42461 4 95215161 to 95215196 35 - TSS region transcription start site region 42461
Tssr37821 4 95215363 to 95215368 5 + TSS region transcription start site region 37821
Tssr37822 4 95215432 to 95215446 14 + TSS region transcription start site region 37822
Tssr37823 4 95215468 to 95215475 7 + TSS region transcription start site region 37823
Gm46863 4 95254826 to 95259161 4335 + pseudogene predicted gene, 46863
D4Mit358 4 95336187 to 95336348 161 DNA segment DNA Segment, Chr 4, Massachusetts Institute of Technology-358
Gm29064 4 95401978 to 95402790 812 - lincRNA gene predicted gene 29064
Gm830 4 95466913 to 95487394 20481 - unclassified non-coding RNA gene predicted gene 830
Gm12707 4 95486896 to 95487630 734 + lncRNA gene predicted gene 12707
Tssr42462 4 95487381 to 95487398 17 - TSS region transcription start site region 42462
Tssr42463 4 95487413 to 95487454 41 - TSS region transcription start site region 42463
Tssr1234 4 95505129 to 95505131 2 + TSS region transcription start site region 1234
Gm25004 4 95524044 to 95524204 160 + snRNA gene predicted gene, 25004
Gm40206 4 95553418 to 95557366 3948 - lncRNA gene predicted gene, 40206
Tssr37824 4 95557494 to 95557544 50 + TSS region transcription start site region 37824
Fggy 4 95557507 to 95926939 369432 + protein coding gene FGGY carbohydrate kinase domain containing
Gm20651 4 95561831 to 95562159 328 - pseudogene predicted gene 20651
Tssr37825 4 95579417 to 95579428 11 + TSS region transcription start site region 37825
Tssr37826 4 95579446 to 95579462 16 + TSS region transcription start site region 37826
Tssr37827 4 95579463 to 95579499 36 + TSS region transcription start site region 37827
4930509A12Rik 4 95634742 to 95635230 488 unclassified gene RIKEN cDNA 4930509A12 gene
Tssr37828 4 95637414 to 95637418 4 + TSS region transcription start site region 37828
Tssr37829 4 95681641 to 95681649 8 + TSS region transcription start site region 37829
Tssr37830 4 95738372 to 95738400 28 + TSS region transcription start site region 37830
Tssr37831 4 95738409 to 95738424 15 + TSS region transcription start site region 37831
Tssr42464 4 95741236 to 95741240 4 - TSS region transcription start site region 42464
Tssr37832 4 95850760 to 95850765 5 + TSS region transcription start site region 37832
Tssr1235 4 95934126 to 95934133 7 - TSS region transcription start site region 1235
Tssr37833 4 95947146 to 95947155 9 + TSS region transcription start site region 37833
9530080O11Rik 4 95959715 to 95967655 7940 - lncRNA gene RIKEN cDNA 9530080O11 gene
Cpgi14458 4 95966843 to 95967931 1088 CpG island CpG island 14458
Tssr42465 4 95967005 to 95967017 12 - TSS region transcription start site region 42465
Tssr37834 4 95967117 to 95967145 28 + TSS region transcription start site region 37834
Tssr37835 4 95967205 to 95967320 115 + TSS region transcription start site region 37835
Hook1 4 95967240 to 96025413 58173 + protein coding gene hook microtubule tethering protein 1
Tssr37836 4 95967322 to 95967381 59 + TSS region transcription start site region 37836
Tssr37837 4 95967384 to 95967403 19 + TSS region transcription start site region 37837
Tssr37838 4 95967405 to 95967426 21 + TSS region transcription start site region 37838
Tssr37839 4 95969919 to 95969928 9 + TSS region transcription start site region 37839
Tssr37840 4 95969950 to 95969959 9 + TSS region transcription start site region 37840
2900072D07Rik 4 96029758 to 96030748 990 unclassified gene RIKEN cDNA 2900072D07 gene
Cyp2j13 4 96042660 to 96077566 34906 - protein coding gene cytochrome P450, family 2, subfamily j, polypeptide 13