Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:94630748-95060752

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44 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ift74 4 94614491 to 94693229 78738 + protein coding gene intraflagellar transport 74
Lrrc19 4 94636653 to 94650144 13491 - protein coding gene leucine rich repeat containing 19
Tssr37801 4 94642417 to 94642421 4 + TSS region transcription start site region 37801
Tssr42448 4 94650092 to 94650127 35 - TSS region transcription start site region 42448
Tssr42449 4 94650134 to 94650149 15 - TSS region transcription start site region 42449
Mir872 4 94665157 to 94665237 80 + miRNA gene microRNA 872
Gm40205 4 94721603 to 94732564 10961 + lncRNA gene predicted gene, 40205
Tssr37802 4 94735211 to 94735224 13 + TSS region transcription start site region 37802
Tssr37803 4 94739276 to 94739298 22 + TSS region transcription start site region 37803
Tek 4 94739289 to 94874976 135687 + protein coding gene TEK receptor tyrosine kinase
Tssr37804 4 94739448 to 94739455 7 + TSS region transcription start site region 37804
Tssr37805 4 94739462 to 94739484 22 + TSS region transcription start site region 37805
Tssr37806 4 94739493 to 94739513 20 + TSS region transcription start site region 37806
Tssr37807 4 94739522 to 94739537 15 + TSS region transcription start site region 37807
Tssr37808 4 94739565 to 94739587 22 + TSS region transcription start site region 37808
Tssr1232 4 94740018 to 94740021 3 + TSS region transcription start site region 1232
Tssr37809 4 94751583 to 94751586 3 + TSS region transcription start site region 37809
Tssr37810 4 94820769 to 94820785 16 + TSS region transcription start site region 37810
Tssr37811 4 94845748 to 94845752 4 + TSS region transcription start site region 37811
Eqtn 4 94907267 to 94928843 21576 - protein coding gene equatorin, sperm acrosome associated
Tssr42450 4 94928789 to 94928815 26 - TSS region transcription start site region 42450
Tssr42451 4 94928820 to 94928848 28 - TSS region transcription start site region 42451
Gm12693 4 94935621 to 94936103 482 + pseudogene predicted gene 12693
Mysm1 4 94942040 to 94979100 37060 - protein coding gene myb-like, SWIRM and MPN domains 1
Tssr42452 4 94945964 to 94945972 8 - TSS region transcription start site region 42452
Cpgi14454 4 94978654 to 94979444 790 CpG island CpG island 14454
Tssr42453 4 94979063 to 94979106 43 - TSS region transcription start site region 42453
Gm12694 4 94979301 to 95018964 39663 + antisense lncRNA gene predicted gene 12694
Gm12703 4 95029963 to 95048370 18407 - unclassified non-coding RNA gene predicted gene 12703
Gm12704 4 95039162 to 95039625 463 - pseudogene predicted gene 12704
Jun 4 95049036 to 95052222 3186 - protein coding gene jun proto-oncogene
Tssr42454 4 95049805 to 95049810 5 - TSS region transcription start site region 42454
Tssr42455 4 95049826 to 95049841 15 - TSS region transcription start site region 42455
Cpgi14455 4 95049906 to 95053388 3482 CpG island CpG island 14455
Tssr42456 4 95050429 to 95050445 16 - TSS region transcription start site region 42456
Tssr42457 4 95051174 to 95051210 36 - TSS region transcription start site region 42457
Tssr42458 4 95051261 to 95051312 51 - TSS region transcription start site region 42458
Junos 4 95051534 to 95167318 115784 + antisense lncRNA gene jun proto-oncogene, opposite strand
Tssr42459 4 95052170 to 95052181 11 - TSS region transcription start site region 42459
Tssr42460 4 95052188 to 95052207 19 - TSS region transcription start site region 42460
Tssr37812 4 95052560 to 95052573 13 + TSS region transcription start site region 37812
Tssr37813 4 95052857 to 95052873 16 + TSS region transcription start site region 37813
Tssr37814 4 95054091 to 95054092 1 + TSS region transcription start site region 37814
Tssr37815 4 95054677 to 95054681 4 + TSS region transcription start site region 37815