Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:94056592-94606602

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35 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Habiir3 4 83838893 to 94405503 10566610 QTL hyperoxic acute lung injury imprinted region 3
Gm12647 4 94061373 to 94061637 264 + pseudogene predicted gene 12647
Gm12648 4 94089576 to 94425588 336012 - lincRNA gene predicted gene 12648
Gm23836 4 94098290 to 94098418 128 + snoRNA gene predicted gene, 23836
Gm18005 4 94104039 to 94104837 798 - pseudogene predicted gene, 18005
Tssr42435 4 94327852 to 94327857 5 - TSS region transcription start site region 42435
Tssr42436 4 94329428 to 94329432 4 - TSS region transcription start site region 42436
Tssr42437 4 94331592 to 94331602 10 - TSS region transcription start site region 42437
Tssr42438 4 94331613 to 94331626 13 - TSS region transcription start site region 42438
Tssr1231 4 94331654 to 94331655 1 - TSS region transcription start site region 1231
Gm12654 4 94395658 to 94396244 586 + pseudogene predicted gene 12654
D4Mit145 4 94405373 to 94405503 130 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 145
Cpgi14450 4 94428880 to 94429177 297 CpG island CpG island 14450
Gm26410 4 94434224 to 94434484 260 - unclassified non-coding RNA gene predicted gene, 26410
Gm12655 4 94460931 to 94477180 16249 - unclassified non-coding RNA gene predicted gene 12655
Tssr42439 4 94477167 to 94477207 40 - TSS region transcription start site region 42439
Gm22804 4 94487883 to 94487983 100 + snoRNA gene predicted gene, 22804
D4Mit350 4 94495101 to 94495222 121 DNA segment DNA Segment, Chr 4, Massachusetts Institute of Technology 350
Gm12656 4 94496989 to 94497556 567 + pseudogene predicted gene 12656
Caap1 4 94500081 to 94556796 56715 - protein coding gene caspase activity and apoptosis inhibitor 1
Tssr42440 4 94533305 to 94533310 5 - TSS region transcription start site region 42440
Tssr42441 4 94555080 to 94555086 6 - TSS region transcription start site region 42441
Cpgi14451 4 94556183 to 94556969 786 CpG island CpG island 14451
Gm10306 4 94556546 to 94557078 532 + protein coding gene predicted gene 10306
Tssr42442 4 94556737 to 94556802 65 - TSS region transcription start site region 42442
Plaa 4 94567514 to 94603244 35730 - protein coding gene phospholipase A2, activating protein
Tssr42443 4 94569285 to 94569304 19 - TSS region transcription start site region 42443
Tssr42444 4 94587345 to 94587361 16 - TSS region transcription start site region 42444
Gm12657 4 94599385 to 94599795 410 + pseudogene predicted gene 12657
Cpgi14452 4 94602590 to 94603612 1022 CpG island CpG island 14452
Tssr42445 4 94603095 to 94603193 98 - TSS region transcription start site region 42445
Tssr42446 4 94603203 to 94603228 25 - TSS region transcription start site region 42446
Tssr42447 4 94603239 to 94603253 14 - TSS region transcription start site region 42447
Tssr37794 4 94603261 to 94603281 20 + TSS region transcription start site region 37794
Tssr37795 4 94603521 to 94603538 17 + TSS region transcription start site region 37795