Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:92330500-94521395

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53 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Abbp2 4 53550839 to 93875068 40324229 QTL A/J and C57BL/6 blood pressure 2
Habiir3 4 83838893 to 94405503 10566610 QTL hyperoxic acute lung injury imprinted region 3
Tssr42427 4 92339842 to 92339848 6 - TSS region transcription start site region 42427
Gm12638 4 92373051 to 92373348 297 - pseudogene predicted gene 12638
Gm12637 4 92528551 to 92548304 19753 + lincRNA gene predicted gene 12637
D4Mit144 4 92539786 to 92539915 129 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 144
D4Dcr12 4 92805212 to 92805308 96 DNA segment DNA Segment, Chr 4, Derry C. Roopenian 12
Gm22605 4 92866475 to 92866582 107 - snRNA gene predicted gene, 22605
Gm12639 4 92970244 to 92970736 492 - pseudogene predicted gene 12639
Gm12641 4 93106988 to 93109914 2926 + pseudogene predicted gene 12641
D4Mit230 4 93136637 to 93136785 148 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 230
Gm12642 4 93265432 to 93266288 856 - pseudogene predicted gene 12642
Tusc1 4 93334148 to 93335511 1363 - protein coding gene tumor suppressor candidate 1
Cpgi14449 4 93334481 to 93335938 1457 CpG island CpG island 14449
Tssr1230 4 93334777 to 93334816 39 + TSS region transcription start site region 1230
Tssr37793 4 93334832 to 93334845 13 + TSS region transcription start site region 37793
Tssr42428 4 93335111 to 93335122 11 - TSS region transcription start site region 42428
Tssr42429 4 93335380 to 93335423 43 - TSS region transcription start site region 42429
Tssr42430 4 93335425 to 93335436 11 - TSS region transcription start site region 42430
Tssr42431 4 93335510 to 93335548 38 - TSS region transcription start site region 42431
Tssr42432 4 93335814 to 93335825 11 - TSS region transcription start site region 42432
Tssr42433 4 93335826 to 93335860 34 - TSS region transcription start site region 42433
Gm31828 4 93370406 to 93481395 110989 - lncRNA gene predicted gene, 31828
Gm12649 4 93453258 to 93671070 217812 - lincRNA gene predicted gene 12649
Tssr42434 4 93481355 to 93481390 35 - TSS region transcription start site region 42434
Gm23443 4 93545150 to 93545277 127 - snoRNA gene predicted gene, 23443
Gm12640 4 93599186 to 93599495 309 + pseudogene predicted gene 12640
Gm24796 4 93600979 to 93601085 106 + snRNA gene predicted gene, 24796
Gm22619 4 93745888 to 93745997 109 - miRNA gene predicted gene, 22619
Gm12650 4 93802333 to 93802590 257 + pseudogene predicted gene 12650
Gm32035 4 93830417 to 93864235 33818 - lncRNA gene predicted gene, 32035
D4Mit166.2 4 93874839 to 93874995 156 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 166.2
D4Mit166 4 93874870 to 93875068 198 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 166
Gauc 4 93874870 to 93875068 198 QTL glucose area under curve
Gm12647 4 94061373 to 94061637 264 + pseudogene predicted gene 12647
Gm12648 4 94089576 to 94425588 336012 - lincRNA gene predicted gene 12648
Gm23836 4 94098290 to 94098418 128 + snoRNA gene predicted gene, 23836
Gm18005 4 94104039 to 94104837 798 - pseudogene predicted gene, 18005
Tssr42435 4 94327852 to 94327857 5 - TSS region transcription start site region 42435
Tssr42436 4 94329428 to 94329432 4 - TSS region transcription start site region 42436
Tssr42437 4 94331592 to 94331602 10 - TSS region transcription start site region 42437
Tssr42438 4 94331613 to 94331626 13 - TSS region transcription start site region 42438
Tssr1231 4 94331654 to 94331655 1 - TSS region transcription start site region 1231
Gm12654 4 94395658 to 94396244 586 + pseudogene predicted gene 12654
D4Mit145 4 94405373 to 94405503 130 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 145
Cpgi14450 4 94428880 to 94429177 297 CpG island CpG island 14450
Gm26410 4 94434224 to 94434484 260 - unclassified non-coding RNA gene predicted gene, 26410
Gm12655 4 94460931 to 94477180 16249 - unclassified non-coding RNA gene predicted gene 12655
Tssr42439 4 94477167 to 94477207 40 - TSS region transcription start site region 42439
Gm22804 4 94487883 to 94487983 100 + snoRNA gene predicted gene, 22804
D4Mit350 4 94495101 to 94495222 121 DNA segment DNA Segment, Chr 4, Massachusetts Institute of Technology 350
Gm12656 4 94496989 to 94497556 567 + pseudogene predicted gene 12656
Caap1 4 94500081 to 94556796 56715 - protein coding gene caspase activity and apoptosis inhibitor 1