Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:89077291-89287294

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26 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Wincr1 4 89050307 to 89084610 34303 + lincRNA gene WNT induced non-coding RNA 1
D4Mit301 4 89099304 to 89099407 103 DNA segment DNA Segment, Chr 4, Massachusetts Institute of Technology 301
Gm12602 4 89100664 to 89128226 27562 - lncRNA gene predicted gene 12602
Tssr37775 4 89123314 to 89123325 11 + TSS region transcription start site region 37775
Tssr37776 4 89123331 to 89123347 16 + TSS region transcription start site region 37776
Tssr37777 4 89124249 to 89124260 11 + TSS region transcription start site region 37777
Tssr42402 4 89126542 to 89126556 14 - TSS region transcription start site region 42402
Tssr42403 4 89128217 to 89128237 20 - TSS region transcription start site region 42403
Cpgi14434 4 89137113 to 89138007 894 CpG island CpG island 14434
Mtap 4 89137370 to 89181090 43720 + protein coding gene methylthioadenosine phosphorylase
Tssr37778 4 89137374 to 89137447 73 + TSS region transcription start site region 37778
Tssr37779 4 89152116 to 89152120 4 + TSS region transcription start site region 37779
Gm12607 4 89161699 to 89162191 492 - pseudogene predicted gene 12607
Tssr37780 4 89182291 to 89182294 3 + TSS region transcription start site region 37780
Gm26490 4 89182981 to 89183120 139 - snoRNA gene predicted gene, 26490
Tgif2-ps1 4 89216864 to 89217816 952 + pseudogene TGFB-induced factor homeobox 2, pseudogene 1
Gm12606 4 89235699 to 89273403 37704 - lincRNA gene predicted gene 12606
Cpgi14435 4 89273087 to 89273758 671 CpG island CpG island 14435
Cdkn2a 4 89274473 to 89294619 20146 - protein coding gene cyclin dependent kinase inhibitor 2A
Tssr42404 4 89274576 to 89274583 7 - TSS region transcription start site region 42404
Cpgi14436 4 89274931 to 89275091 160 CpG island CpG island 14436
Cpgi14437 4 89276411 to 89277077 666 CpG island CpG island 14437
Cpgi14438 4 89281927 to 89282549 622 CpG island CpG island 14438
Tssr42405 4 89282113 to 89282151 38 - TSS region transcription start site region 42405
Tssr42406 4 89282152 to 89282161 9 - TSS region transcription start site region 42406
Tssr42407 4 89282181 to 89282188 7 - TSS region transcription start site region 42407