Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:89018314-89228325

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34 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
W6q15 4 17892616 to 89063979 71171363 QTL weight 6 weeks QTL 15
Lvrq9 4 17892616 to 89063979 71171363 QTL liver weight QTL 9
Kidq4 4 17892616 to 89063979 71171363 QTL kidney weight QTL 4
Gm34568 4 88956416 to 89031301 74885 + lncRNA gene predicted gene, 34568
Gm49891 4 88995118 to 89039192 44074 - lincRNA gene predicted gene, 49891
Tssr37772 4 89050240 to 89050248 8 + TSS region transcription start site region 37772
Tssr37773 4 89050273 to 89050280 7 + TSS region transcription start site region 37773
Tssr37774 4 89050296 to 89050324 28 + TSS region transcription start site region 37774
Wincr1 4 89050307 to 89084610 34303 + lincRNA gene WNT induced non-coding RNA 1
D4Mit27 4 89063832 to 89063979 147 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 27
Nss1 4 89063832 to 89063979 147 QTL NOD Sjogren's syndrome 1
Berr4 4 89063832 to 89063979 147 QTL berghei resistance locus 4
Pitm2 4 89063832 to 89063979 147 QTL prion incubation time 2
D4Mit301 4 89099304 to 89099407 103 DNA segment DNA Segment, Chr 4, Massachusetts Institute of Technology 301
Gm12602 4 89100664 to 89128226 27562 - lncRNA gene predicted gene 12602
Tssr37775 4 89123314 to 89123325 11 + TSS region transcription start site region 37775
Tssr37776 4 89123331 to 89123347 16 + TSS region transcription start site region 37776
Tssr37777 4 89124249 to 89124260 11 + TSS region transcription start site region 37777
Tssr42402 4 89126542 to 89126556 14 - TSS region transcription start site region 42402
Tssr42403 4 89128217 to 89128237 20 - TSS region transcription start site region 42403
Cpgi14434 4 89137113 to 89138007 894 CpG island CpG island 14434
Mtap 4 89137370 to 89181090 43720 + protein coding gene methylthioadenosine phosphorylase
Tssr37778 4 89137374 to 89137447 73 + TSS region transcription start site region 37778
Tssr37779 4 89152116 to 89152120 4 + TSS region transcription start site region 37779
Gm12607 4 89161699 to 89162191 492 - pseudogene predicted gene 12607
Tssr37780 4 89182291 to 89182294 3 + TSS region transcription start site region 37780
Gm26490 4 89182981 to 89183120 139 - snoRNA gene predicted gene, 26490
Tgif2-ps1 4 89216864 to 89217816 952 + pseudogene TGFB-induced factor homeobox 2, pseudogene 1
Abd1 4 116413923 to 89063832 -27350091 QTL autoimmune biliary disease 1
W3q17 4 140740892 to 89063832 -51677060 QTL weight 3 weeks QTL 17
W6q13 4 140740892 to 89063832 -51677060 QTL weight 6 weeks QTL 13
W10q10 4 140740892 to 89063832 -51677060 QTL weight 10 weeks QTL 10
Lvrq8 4 140740892 to 89063832 -51677060 QTL liver weight QTL 8
Bmd7 4 151570093 to 89063832 -62506261 QTL bone mineral density 7