Gene symbol | Chromo- some |
Coordinates (bp, mm10) | Size (bp) | Strand | Feature Type | Gene name |
---|---|---|---|---|---|---|
Lvrq9 | 4 | 71171363 | QTL | liver weight QTL 9 | ||
W6q15 | 4 | 71171363 | QTL | weight 6 weeks QTL 15 | ||
Kidq4 | 4 | 71171363 | QTL | kidney weight QTL 4 | ||
Abbp2 | 4 | 40324229 | QTL | A/J and C57BL/6 blood pressure 2 | ||
Stmm3 | 4 | 27752103 | QTL | skin tumor modifier of MSM 3 | ||
Lyr | 4 | 8016743 | QTL | lymphoma resistance | ||
Habiir3 | 4 | 10566610 | QTL | hyperoxic acute lung injury imprinted region 3 | ||
Ifna16 | 4 | 569 | - | protein coding gene | interferon alpha 16 | |
Tlsr1 | 4 | 6386617 | QTL | thymic lymphoma suppressor region 1 | ||
D4Wsm1 | 4 | 146 | DNA segment | DNA segment, Chr 4, WSM 1 | ||
Ifna2 | 4 | 572 | - | protein coding gene | interferon alpha 2 | |
Ifnab | 4 | 669 | - | protein coding gene | interferon alpha B | |
Gm13273 | 4 | 507 | - | pseudogene | predicted gene 13273 | |
Gm13282 | 4 | 544 | - | pseudogene | predicted gene 13282 | |
Klhl9 | 4 | 4173 | - | protein coding gene | kelch-like 9 | |
Tssr42388 | 4 | 5 | - | TSS region | transcription start site region 42388 | |
Tssr42389 | 4 | 5 | - | TSS region | transcription start site region 42389 | |
Cpgi14430 | 4 | 934 | CpG island | CpG island 14430 | ||
Gm26566 | 4 | 1037 | + | protein coding gene | predicted gene, 26566 | |
Tssr42390 | 4 | 31 | - | TSS region | transcription start site region 42390 | |
Tssr42391 | 4 | 13 | - | TSS region | transcription start site region 42391 | |
Tssr1228 | 4 | 8 | - | TSS region | transcription start site region 1228 | |
Gm13274 | 4 | 21036 | - | antisense lncRNA gene | predicted gene 13274 | |
Tssr42392 | 4 | 5 | - | TSS region | transcription start site region 42392 | |
Gm49884 | 4 | 207 | + | pseudogene | predicted gene, 49884 | |
Gm13271 | 4 | 548 | + | protein coding gene | predicted gene 13271 | |
Cpgi14431 | 4 | 345 | CpG island | CpG island 14431 | ||
Gm13286 | 4 | 536 | + | pseudogene | predicted gene 13286 | |
Gm10583 | 4 | 399 | - | pseudogene | predicted gene 10583 | |
Gm13283 | 4 | 810 | + | protein coding gene | predicted gene 13283 | |
Gm10582 | 4 | 399 | - | pseudogene | predicted gene 10582 | |
Gm13284 | 4 | 7897 | + | pseudogene | predicted gene 13284 | |
Gm10581 | 4 | 234 | - | pseudogene | predicted gene 10581 | |
Gm13290 | 4 | 967 | + | protein coding gene | predicted gene 13290 | |
Gm10580 | 4 | 399 | - | pseudogene | predicted gene 10580 | |
Gm13289 | 4 | 548 | + | protein coding gene | predicted gene 13289 | |
Gm13272 | 4 | 810 | + | protein coding gene | predicted gene 13272 | |
Ifnz | 4 | 1461 | + | protein coding gene | interferon zeta | |
Gm26525 | 4 | 9936 | - | lincRNA gene | predicted gene, 26525 | |
Gm13276 | 4 | 548 | + | protein coding gene | predicted gene 13276 | |
Gm13277 | 4 | 548 | + | protein coding gene | predicted gene 13277 | |
Gm13278 | 4 | 548 | + | protein coding gene | predicted gene 13278 | |
Gm13275 | 4 | 548 | + | protein coding gene | predicted gene 13275 | |
Gm26867 | 4 | 4081 | - | lincRNA gene | predicted gene, 26867 | |
Gm13279 | 4 | 548 | + | protein coding gene | predicted gene 13279 | |
Gm13285 | 4 | 548 | + | protein coding gene | predicted gene 13285 | |
Gm13287 | 4 | 548 | + | protein coding gene | predicted gene 13287 | |
Gm13288 | 4 | 2849 | + | protein coding gene | predicted gene 13288 | |
Ifna7 | 4 | 572 | + | protein coding gene | interferon alpha 7 | |
Ifna11 | 4 | 572 | + | protein coding gene | interferon alpha 11 | |
Ifna6 | 4 | 569 | + | protein coding gene | interferon alpha 6 | |
Ifna5 | 4 | 569 | + | protein coding gene | interferon alpha 5 | |
Ifna4 | 4 | 560 | + | protein coding gene | interferon alpha 4 | |
Ifna1 | 4 | 569 | + | protein coding gene | interferon alpha 1 | |
Ifna | 4 | 334 | complex/cluster/region | interferon alpha | ||
4930553M12Rik | 4 | 1147 | - | lincRNA gene | RIKEN cDNA 4930553M12 gene | |
Cpgi14432 | 4 | 376 | CpG island | CpG island 14432 | ||
Tssr37771 | 4 | 26 | + | TSS region | transcription start site region 37771 | |
Gm34457 | 4 | 3154 | + | lncRNA gene | predicted gene, 34457 | |
Ifne | 4 | 663 | - | protein coding gene | interferon epsilon | |
Tssr42393 | 4 | 22 | - | TSS region | transcription start site region 42393 | |
Gm49890 | 4 | 28666 | - | lincRNA gene | predicted gene, 49890 | |
Mir31 | 4 | 105 | - | miRNA gene | microRNA 31 | |
Tssr42394 | 4 | 4 | - | TSS region | transcription start site region 42394 | |
Tssr42395 | 4 | 10 | - | TSS region | transcription start site region 42395 | |
Tssr42396 | 4 | 7 | - | TSS region | transcription start site region 42396 | |
Cpgi14433 | 4 | 1102 | CpG island | CpG island 14433 | ||
Tssr42397 | 4 | 10 | - | TSS region | transcription start site region 42397 | |
Tssr42398 | 4 | 44 | - | TSS region | transcription start site region 42398 | |
Tssr42399 | 4 | 11 | - | TSS region | transcription start site region 42399 | |
Tssr42400 | 4 | 16 | - | TSS region | transcription start site region 42400 | |
Gm34568 | 4 | 74885 | + | lncRNA gene | predicted gene, 34568 | |
Tssr42401 | 4 | 33 | - | TSS region | transcription start site region 42401 | |
Gm49891 | 4 | 44074 | - | lincRNA gene | predicted gene, 49891 | |
Tssr37772 | 4 | 8 | + | TSS region | transcription start site region 37772 | |
Tssr37773 | 4 | 7 | + | TSS region | transcription start site region 37773 | |
Tssr37774 | 4 | 28 | + | TSS region | transcription start site region 37774 | |
Wincr1 | 4 | 34303 | + | lincRNA gene | WNT induced non-coding RNA 1 | |
Pitm2 | 4 | 147 | QTL | prion incubation time 2 | ||
Nss1 | 4 | 147 | QTL | NOD Sjogren's syndrome 1 | ||
D4Mit27 | 4 | 147 | DNA segment | DNA segment, Chr 4, Massachusetts Institute of Technology 27 | ||
Berr4 | 4 | 147 | QTL | berghei resistance locus 4 | ||
D4Mit301 | 4 | 103 | DNA segment | DNA Segment, Chr 4, Massachusetts Institute of Technology 301 | ||
Gm12602 | 4 | 27562 | - | lncRNA gene | predicted gene 12602 | |
Tssr37775 | 4 | 11 | + | TSS region | transcription start site region 37775 | |
Tssr37776 | 4 | 16 | + | TSS region | transcription start site region 37776 | |
Tssr37777 | 4 | 11 | + | TSS region | transcription start site region 37777 | |
Tssr42402 | 4 | 14 | - | TSS region | transcription start site region 42402 | |
Tssr42403 | 4 | 20 | - | TSS region | transcription start site region 42403 | |
Cpgi14434 | 4 | 894 | CpG island | CpG island 14434 | ||
Mtap | 4 | 43720 | + | protein coding gene | methylthioadenosine phosphorylase | |
Tssr37778 | 4 | 73 | + | TSS region | transcription start site region 37778 | |
Tssr37779 | 4 | 4 | + | TSS region | transcription start site region 37779 | |
Gm12607 | 4 | 492 | - | pseudogene | predicted gene 12607 | |
Tssr37780 | 4 | 3 | + | TSS region | transcription start site region 37780 | |
Gm26490 | 4 | 139 | - | snoRNA gene | predicted gene, 26490 | |
Tgif2-ps1 | 4 | 952 | + | pseudogene | TGFB-induced factor homeobox 2, pseudogene 1 | |
Gm12606 | 4 | 37704 | - | lincRNA gene | predicted gene 12606 | |
Cpgi14435 | 4 | 671 | CpG island | CpG island 14435 | ||
Cdkn2a | 4 | 20146 | - | protein coding gene | cyclin dependent kinase inhibitor 2A | |
Tssr42404 | 4 | 7 | - | TSS region | transcription start site region 42404 | |
Cpgi14436 | 4 | 160 | CpG island | CpG island 14436 | ||
Cpgi14437 | 4 | 666 | CpG island | CpG island 14437 | ||
Cpgi14438 | 4 | 622 | CpG island | CpG island 14438 | ||
Tssr42405 | 4 | 38 | - | TSS region | transcription start site region 42405 | |
Tssr42406 | 4 | 9 | - | TSS region | transcription start site region 42406 | |
Tssr42407 | 4 | 7 | - | TSS region | transcription start site region 42407 | |
Cpgi14439 | 4 | 1652 | CpG island | CpG island 14439 | ||
Tssr42408 | 4 | 5 | - | TSS region | transcription start site region 42408 | |
Tssr42409 | 4 | 14 | - | TSS region | transcription start site region 42409 | |
Tssr42410 | 4 | 34 | - | TSS region | transcription start site region 42410 | |
Tssr42411 | 4 | 3 | - | TSS region | transcription start site region 42411 | |
Tssr37781 | 4 | 13 | + | TSS region | transcription start site region 37781 | |
Tssr37782 | 4 | 41 | + | TSS region | transcription start site region 37782 | |
Tssr37783 | 4 | 10 | + | TSS region | transcription start site region 37783 | |
Tssr37784 | 4 | 4 | + | TSS region | transcription start site region 37784 | |
Cdkn2b | 4 | 4740 | - | protein coding gene | cyclin dependent kinase inhibitor 2B | |
Cpgi14440 | 4 | 480 | CpG island | CpG island 14440 | ||
Cpgi14441 | 4 | 846 | CpG island | CpG island 14441 | ||
Tssr42412 | 4 | 56 | - | TSS region | transcription start site region 42412 | |
Tssr42413 | 4 | 4 | - | TSS region | transcription start site region 42413 | |
D4Mit300 | 4 | 123 | DNA segment | DNA Segment, Chr 4, Massachusetts Institute of Technology 300 | ||
Gm12609 | 4 | 17923 | + | unclassified non-coding RNA gene | predicted gene 12609 | |
D4Mit245 | 4 | 116 | DNA segment | DNA segment, Chr 4, Massachusetts Institute of Technology 245 | ||
Gm12610 | 4 | 41639 | + | lncRNA gene | predicted gene 12610 | |
D4Dcr11 | 4 | 104 | DNA segment | DNA Segment, Chr 4, Derry C. Roopenian 11 | ||
Gm12608 | 4 | 2372 | - | pseudogene | predicted gene 12608 | |
Gm27580 | 4 | 148 | + | unclassified non-coding RNA gene | predicted gene, 27580 | |
Tssr1229 | 4 | 1 | + | TSS region | transcription start site region 1229 | |
Tssr37785 | 4 | 5 | + | TSS region | transcription start site region 37785 | |
D4Mit133 | 4 | 89 | DNA segment | DNA segment, Chr 4, Massachusetts Institute of Technology 133 | ||
Cpgi14442 | 4 | 593 | CpG island | CpG island 14442 | ||
Cpgi14443 | 4 | 1287 | CpG island | CpG island 14443 | ||
Tssr37786 | 4 | 47 | + | TSS region | transcription start site region 37786 | |
Tssr37787 | 4 | 16 | + | TSS region | transcription start site region 37787 | |
Tssr37788 | 4 | 8 | + | TSS region | transcription start site region 37788 | |
Tssr37789 | 4 | 1 | + | TSS region | transcription start site region 37789 | |
Dmrta1 | 4 | 6568 | + | protein coding gene | doublesex and mab-3 related transcription factor like family A1 | |
Tssr37790 | 4 | 2 | + | TSS region | transcription start site region 37790 | |
Tssr42414 | 4 | 3 | - | TSS region | transcription start site region 42414 | |
Gm12629 | 4 | 4482 | + | lincRNA gene | predicted gene 12629 | |
Zfp352 | 4 | 6867 | + | protein coding gene | zinc finger protein 352 | |
Gm12633 | 4 | 1689 | - | pseudogene | predicted gene 12633 | |
Gm12634 | 4 | 991 | + | pseudogene | predicted gene 12634 | |
Gm12635 | 4 | 751 | + | pseudogene | predicted gene 12635 | |
Gm12636 | 4 | 623 | - | pseudogene | predicted gene 12636 | |
Gm12632 | 4 | 494 | + | pseudogene | predicted gene 12632 | |
Gm25244 | 4 | 131 | - | snoRNA gene | predicted gene, 25244 | |
Gm12643 | 4 | 315 | + | pseudogene | predicted gene 12643 | |
D4Mit165 | 4 | 141 | DNA segment | DNA segment, Chr 4, Massachusetts Institute of Technology 165 | ||
Bulb1 | 4 | 142 | QTL | bulb size 1 | ||
D4Mit186 | 4 | 142 | DNA segment | DNA segment, Chr 4, Massachusetts Institute of Technology 186 | ||
Gm12644 | 4 | 605 | + | pseudogene | predicted gene 12644 | |
A730080H06Rik | 4 | 34510 | - | lncRNA gene | RIKEN cDNA A730080H06 gene | |
Elavl2 | 4 | 149293 | - | protein coding gene | ELAV like RNA binding protein 1 | |
Tssr42415 | 4 | 4 | - | TSS region | transcription start site region 42415 | |
Gm12653 | 4 | 560 | + | pseudogene | predicted gene 12653 | |
Cpgi14444 | 4 | 1699 | CpG island | CpG island 14444 | ||
Tssr42416 | 4 | 26 | - | TSS region | transcription start site region 42416 | |
Tssr42417 | 4 | 16 | - | TSS region | transcription start site region 42417 | |
Tssr42418 | 4 | 19 | - | TSS region | transcription start site region 42418 | |
Cpgi14445 | 4 | 186 | CpG island | CpG island 14445 | ||
Mir6402 | 4 | 79 | - | miRNA gene | microRNA 6402 | |
Cpgi14446 | 4 | 838 | CpG island | CpG island 14446 | ||
Cpgi14447 | 4 | 389 | CpG island | CpG island 14447 | ||
Tssr42419 | 4 | 15 | - | TSS region | transcription start site region 42419 | |
Tssr42420 | 4 | 24 | - | TSS region | transcription start site region 42420 | |
Tssr42421 | 4 | 15 | - | TSS region | transcription start site region 42421 | |
Tssr42422 | 4 | 44 | - | TSS region | transcription start site region 42422 | |
Tssr42423 | 4 | 12 | - | TSS region | transcription start site region 42423 | |
Tssr42424 | 4 | 11 | - | TSS region | transcription start site region 42424 | |
Cpgi14448 | 4 | 393 | CpG island | CpG island 14448 | ||
D4Mit329 | 4 | 110 | DNA segment | DNA segment, Chr 4, Massachusetts Institute of Technology 329 | ||
Gm40202 | 4 | 39865 | + | lncRNA gene | predicted gene, 40202 | |
D4Mit15 | 4 | 284 | DNA segment | DNA segment, Chr 4, Massachusetts Institute of Technology 15 | ||
Plep | 4 | 284 | QTL | plasma lepin levels | ||
Sluc43a | 4 | 284 | QTL | susceptibility to lung cancer 43a | ||
Sluc43b | 4 | 284 | QTL | susceptibility to lung cancer 43b | ||
Sluc43c | 4 | 284 | QTL | susceptibility to lung cancer 43c | ||
Sluc43d | 4 | 284 | QTL | susceptibility to lung cancer 43d | ||
Sluc43e | 4 | 284 | QTL | susceptibility to lung cancer 43e | ||
Sluc43f | 4 | 284 | QTL | susceptibility to lung cancer 43f | ||
Sluc43g | 4 | 284 | QTL | susceptibility to lung cancer 43g | ||
Sluc43h | 4 | 284 | QTL | susceptibility to lung cancer 43h | ||
Sluc43i | 4 | 284 | QTL | susceptibility to lung cancer 43i | ||
Gm12668 | 4 | 3550 | + | lincRNA gene | predicted gene 12668 | |
Gm12670 | 4 | 4837 | + | lincRNA gene | predicted gene 12670 | |
Gm12667 | 4 | 1331 | + | pseudogene | predicted gene 12667 | |
Gm12669 | 4 | 1005 | - | pseudogene | predicted gene 12669 | |
Gm12671 | 4 | 1001 | - | pseudogene | predicted gene 12671 | |
4930577H14Rik | 4 | 1098 | - | lincRNA gene | RIKEN cDNA 4930577H14 gene | |
Tssr42425 | 4 | 10 | - | TSS region | transcription start site region 42425 | |
Tssr37791 | 4 | 16 | + | TSS region | transcription start site region 37791 | |
Izumo3 | 4 | 2903 | - | protein coding gene | IZUMO family member 3 | |
Tssr42426 | 4 | 42 | - | TSS region | transcription start site region 42426 | |
Gm40203 | 4 | 3667 | + | lncRNA gene | predicted gene, 40203 | |
Tssr37792 | 4 | 6 | + | TSS region | transcription start site region 37792 | |
Gm12666 | 4 | 651 | - | protein coding gene | predicted gene 12666 | |
Gm40204 | 4 | 24476 | + | lncRNA gene | predicted gene, 40204 | |
Tssr42427 | 4 | 6 | - | TSS region | transcription start site region 42427 |