Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:88533641-88754459

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28 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Spir2 4 50682795 to 88592400 37909605 QTL Streptococcus pneumoniae infection resistance 2
Ifna15 4 88557673 to 88558245 572 - protein coding gene interferon alpha 15
Ifna14 4 88571229 to 88571798 569 - protein coding gene interferon alpha 14
Ifna-ps1 4 88578887 to 88580573 1686 - pseudogene interferon alpha gene, pseudogene 1
Ifna9 4 88591813 to 88592385 572 - protein coding gene interferon alpha 9
Mrpl48-ps 4 88599175 to 88599810 635 - pseudogene mitochondrial ribosomal protein L48 pseudogene
Ifna12 4 88602580 to 88603376 796 - protein coding gene interferon alpha 12
Gm12601 4 88612653 to 88614044 1391 - pseudogene predicted gene 12601
C87499 4 88627320 to 88634186 6866 - protein coding gene expressed sequence C87499
Ifna13 4 88643641 to 88644459 818 - protein coding gene interferon alpha 13
Gm13281 4 88648738 to 88649304 566 - pseudogene predicted gene 13281
Ifna16 4 88676287 to 88676856 569 - protein coding gene interferon alpha 16
Tlsr1 4 88682921 to 95069538 6386617 QTL thymic lymphoma suppressor region 1
D4Wsm1 4 88682921 to 88683067 146 DNA segment DNA segment, Chr 4, WSM 1
Ifna2 4 88683207 to 88683779 572 - protein coding gene interferon alpha 2
Ifnab 4 88690599 to 88691268 669 - protein coding gene interferon alpha B
Gm13273 4 88696191 to 88696698 507 - pseudogene predicted gene 13273
Gm13282 4 88707909 to 88708453 544 - pseudogene predicted gene 13282
Klhl9 4 88718292 to 88722465 4173 - protein coding gene kelch-like 9
Tssr42388 4 88719101 to 88719106 5 - TSS region transcription start site region 42388
Tssr42389 4 88720026 to 88720031 5 - TSS region transcription start site region 42389
Cpgi14430 4 88721767 to 88722701 934 CpG island CpG island 14430
Gm26566 4 88721805 to 88722842 1037 + protein coding gene predicted gene, 26566
Tssr42390 4 88722454 to 88722485 31 - TSS region transcription start site region 42390
Tssr42391 4 88722502 to 88722515 13 - TSS region transcription start site region 42391
Tssr1228 4 88722521 to 88722529 8 - TSS region transcription start site region 1228
Gm13274 4 88723681 to 88744717 21036 - antisense lncRNA gene predicted gene 13274
Tssr42392 4 88744348 to 88744353 5 - TSS region transcription start site region 42392