Gene symbol | Chromo- some |
Coordinates (bp, mm10) | Size (bp) | Strand | Feature Type | Gene name |
---|---|---|---|---|---|---|
Kidq4 | 4 | 71171363 | QTL | kidney weight QTL 4 | ||
Lvrq9 | 4 | 71171363 | QTL | liver weight QTL 9 | ||
W6q15 | 4 | 71171363 | QTL | weight 6 weeks QTL 15 | ||
Spir2 | 4 | 37909605 | QTL | Streptococcus pneumoniae infection resistance 2 | ||
Lyr | 4 | 8016743 | QTL | lymphoma resistance | ||
Focad | 4 | 316381 | + | protein coding gene | focadhesin | |
Tssr37768 | 4 | 11 | + | TSS region | transcription start site region 37768 | |
Tssr37769 | 4 | 11 | + | TSS region | transcription start site region 37769 | |
Tssr37770 | 4 | 13 | + | TSS region | transcription start site region 37770 | |
Hacd4 | 4 | 31249 | - | protein coding gene | 3-hydroxyacyl-CoA dehydratase 4 | |
Tssr42379 | 4 | 13 | - | TSS region | transcription start site region 42379 | |
Tssr42380 | 4 | 17 | - | TSS region | transcription start site region 42380 | |
Tssr42381 | 4 | 13 | - | TSS region | transcription start site region 42381 | |
Tssr42382 | 4 | 4 | - | TSS region | transcription start site region 42382 | |
Tssr42383 | 4 | 6 | - | TSS region | transcription start site region 42383 | |
Gdap6 | 4 | 1197 | unclassified gene | ganglioside-induced differentiation-associated-protein 6 | ||
Tssr42384 | 4 | 4 | - | TSS region | transcription start site region 42384 | |
Tssr42385 | 4 | 9 | - | TSS region | transcription start site region 42385 | |
Tssr42386 | 4 | 33 | - | TSS region | transcription start site region 42386 | |
Ifnb1 | 4 | 749 | - | protein coding gene | interferon beta 1, fibroblast | |
Tssr42387 | 4 | 5 | - | TSS region | transcription start site region 42387 | |
Ifna15 | 4 | 572 | - | protein coding gene | interferon alpha 15 | |
Ifna14 | 4 | 569 | - | protein coding gene | interferon alpha 14 | |
Ifna-ps1 | 4 | 1686 | - | pseudogene | interferon alpha gene, pseudogene 1 | |
Ifna9 | 4 | 572 | - | protein coding gene | interferon alpha 9 | |
Mrpl48-ps | 4 | 635 | - | pseudogene | mitochondrial ribosomal protein L48 pseudogene | |
Ifna12 | 4 | 796 | - | protein coding gene | interferon alpha 12 | |
Gm12601 | 4 | 1391 | - | pseudogene | predicted gene 12601 | |
C87499 | 4 | 6866 | - | protein coding gene | expressed sequence C87499 | |
Ifna13 | 4 | 818 | - | protein coding gene | interferon alpha 13 | |
Gm13281 | 4 | 566 | - | pseudogene | predicted gene 13281 | |
Ifna16 | 4 | 569 | - | protein coding gene | interferon alpha 16 | |
Tlsr1 | 4 | 6386617 | QTL | thymic lymphoma suppressor region 1 | ||
D4Wsm1 | 4 | 146 | DNA segment | DNA segment, Chr 4, WSM 1 | ||
Ifna2 | 4 | 572 | - | protein coding gene | interferon alpha 2 | |
Ifnab | 4 | 669 | - | protein coding gene | interferon alpha B | |
Gm13273 | 4 | 507 | - | pseudogene | predicted gene 13273 | |
Gm13282 | 4 | 544 | - | pseudogene | predicted gene 13282 | |
Klhl9 | 4 | 4173 | - | protein coding gene | kelch-like 9 | |
Tssr42388 | 4 | 5 | - | TSS region | transcription start site region 42388 | |
Tssr42389 | 4 | 5 | - | TSS region | transcription start site region 42389 | |
Cpgi14430 | 4 | 934 | CpG island | CpG island 14430 | ||
Gm26566 | 4 | 1037 | + | protein coding gene | predicted gene, 26566 | |
Tssr42390 | 4 | 31 | - | TSS region | transcription start site region 42390 | |
Tssr42391 | 4 | 13 | - | TSS region | transcription start site region 42391 | |
Tssr1228 | 4 | 8 | - | TSS region | transcription start site region 1228 | |
Gm13274 | 4 | 21036 | - | antisense lncRNA gene | predicted gene 13274 | |
Tssr42392 | 4 | 5 | - | TSS region | transcription start site region 42392 | |
Gm49884 | 4 | 207 | + | pseudogene | predicted gene, 49884 | |
Gm13271 | 4 | 548 | + | protein coding gene | predicted gene 13271 | |
Cpgi14431 | 4 | 345 | CpG island | CpG island 14431 | ||
Gm13286 | 4 | 536 | + | pseudogene | predicted gene 13286 | |
Gm10583 | 4 | 399 | - | pseudogene | predicted gene 10583 | |
Gm13283 | 4 | 810 | + | protein coding gene | predicted gene 13283 | |
Gm10582 | 4 | 399 | - | pseudogene | predicted gene 10582 | |
Gm13284 | 4 | 7897 | + | pseudogene | predicted gene 13284 | |
Gm10581 | 4 | 234 | - | pseudogene | predicted gene 10581 | |
Gm13290 | 4 | 967 | + | protein coding gene | predicted gene 13290 | |
Gm10580 | 4 | 399 | - | pseudogene | predicted gene 10580 | |
Gm13289 | 4 | 548 | + | protein coding gene | predicted gene 13289 | |
Gm13272 | 4 | 810 | + | protein coding gene | predicted gene 13272 | |
Ifnz | 4 | 1461 | + | protein coding gene | interferon zeta | |
Gm26525 | 4 | 9936 | - | lincRNA gene | predicted gene, 26525 | |
Gm13276 | 4 | 548 | + | protein coding gene | predicted gene 13276 | |
Gm13277 | 4 | 548 | + | protein coding gene | predicted gene 13277 | |
Gm13278 | 4 | 548 | + | protein coding gene | predicted gene 13278 | |
Gm13275 | 4 | 548 | + | protein coding gene | predicted gene 13275 | |
Gm26867 | 4 | 4081 | - | lincRNA gene | predicted gene, 26867 | |
Gm13279 | 4 | 548 | + | protein coding gene | predicted gene 13279 | |
Gm13285 | 4 | 548 | + | protein coding gene | predicted gene 13285 | |
Gm13287 | 4 | 548 | + | protein coding gene | predicted gene 13287 | |
Gm13288 | 4 | 2849 | + | protein coding gene | predicted gene 13288 | |
Ifna7 | 4 | 572 | + | protein coding gene | interferon alpha 7 | |
Ifna11 | 4 | 572 | + | protein coding gene | interferon alpha 11 | |
Ifna6 | 4 | 569 | + | protein coding gene | interferon alpha 6 | |
Ifna5 | 4 | 569 | + | protein coding gene | interferon alpha 5 | |
Ifna4 | 4 | 560 | + | protein coding gene | interferon alpha 4 | |
Ifna1 | 4 | 569 | + | protein coding gene | interferon alpha 1 | |
Ifna | 4 | 334 | complex/cluster/region | interferon alpha | ||
4930553M12Rik | 4 | 1147 | - | lincRNA gene | RIKEN cDNA 4930553M12 gene | |
Cpgi14432 | 4 | 376 | CpG island | CpG island 14432 | ||
Tssr37771 | 4 | 26 | + | TSS region | transcription start site region 37771 | |
Gm34457 | 4 | 3154 | + | lncRNA gene | predicted gene, 34457 | |
Ifne | 4 | 663 | - | protein coding gene | interferon epsilon | |
Tssr42393 | 4 | 22 | - | TSS region | transcription start site region 42393 | |
Gm49890 | 4 | 28666 | - | lincRNA gene | predicted gene, 49890 | |
Mir31 | 4 | 105 | - | miRNA gene | microRNA 31 | |
Tssr42394 | 4 | 4 | - | TSS region | transcription start site region 42394 | |
Tssr42395 | 4 | 10 | - | TSS region | transcription start site region 42395 | |
Tssr42396 | 4 | 7 | - | TSS region | transcription start site region 42396 | |
Cpgi14433 | 4 | 1102 | CpG island | CpG island 14433 | ||
Tssr42397 | 4 | 10 | - | TSS region | transcription start site region 42397 | |
Tssr42398 | 4 | 44 | - | TSS region | transcription start site region 42398 | |
Tssr42399 | 4 | 11 | - | TSS region | transcription start site region 42399 | |
Tssr42400 | 4 | 16 | - | TSS region | transcription start site region 42400 | |
Gm34568 | 4 | 74885 | + | lncRNA gene | predicted gene, 34568 | |
Tssr42401 | 4 | 33 | - | TSS region | transcription start site region 42401 | |
Gm49891 | 4 | 44074 | - | lincRNA gene | predicted gene, 49891 | |
Tssr37772 | 4 | 8 | + | TSS region | transcription start site region 37772 | |
Tssr37773 | 4 | 7 | + | TSS region | transcription start site region 37773 | |
Tssr37774 | 4 | 28 | + | TSS region | transcription start site region 37774 | |
Wincr1 | 4 | 34303 | + | lincRNA gene | WNT induced non-coding RNA 1 | |
Berr4 | 4 | 147 | QTL | berghei resistance locus 4 | ||
Nss1 | 4 | 147 | QTL | NOD Sjogren's syndrome 1 | ||
D4Mit27 | 4 | 147 | DNA segment | DNA segment, Chr 4, Massachusetts Institute of Technology 27 | ||
Pitm2 | 4 | 147 | QTL | prion incubation time 2 | ||
D4Mit301 | 4 | 103 | DNA segment | DNA Segment, Chr 4, Massachusetts Institute of Technology 301 | ||
Gm12602 | 4 | 27562 | - | lncRNA gene | predicted gene 12602 | |
Tssr37775 | 4 | 11 | + | TSS region | transcription start site region 37775 | |
Tssr37776 | 4 | 16 | + | TSS region | transcription start site region 37776 | |
Tssr37777 | 4 | 11 | + | TSS region | transcription start site region 37777 | |
Tssr42402 | 4 | 14 | - | TSS region | transcription start site region 42402 | |
Tssr42403 | 4 | 20 | - | TSS region | transcription start site region 42403 | |
Cpgi14434 | 4 | 894 | CpG island | CpG island 14434 | ||
Mtap | 4 | 43720 | + | protein coding gene | methylthioadenosine phosphorylase | |
Tssr37778 | 4 | 73 | + | TSS region | transcription start site region 37778 | |
Tssr37779 | 4 | 4 | + | TSS region | transcription start site region 37779 | |
Gm12607 | 4 | 492 | - | pseudogene | predicted gene 12607 | |
Tssr37780 | 4 | 3 | + | TSS region | transcription start site region 37780 | |
Gm26490 | 4 | 139 | - | snoRNA gene | predicted gene, 26490 | |
Tgif2-ps1 | 4 | 952 | + | pseudogene | TGFB-induced factor homeobox 2, pseudogene 1 | |
Gm12606 | 4 | 37704 | - | lincRNA gene | predicted gene 12606 | |
Cpgi14435 | 4 | 671 | CpG island | CpG island 14435 | ||
Cdkn2a | 4 | 20146 | - | protein coding gene | cyclin dependent kinase inhibitor 2A | |
Tssr42404 | 4 | 7 | - | TSS region | transcription start site region 42404 | |
Cpgi14436 | 4 | 160 | CpG island | CpG island 14436 | ||
Cpgi14437 | 4 | 666 | CpG island | CpG island 14437 | ||
Cpgi14438 | 4 | 622 | CpG island | CpG island 14438 | ||
Tssr42405 | 4 | 38 | - | TSS region | transcription start site region 42405 | |
Tssr42406 | 4 | 9 | - | TSS region | transcription start site region 42406 | |
Tssr42407 | 4 | 7 | - | TSS region | transcription start site region 42407 | |
Cpgi14439 | 4 | 1652 | CpG island | CpG island 14439 | ||
Tssr42408 | 4 | 5 | - | TSS region | transcription start site region 42408 | |
Tssr42409 | 4 | 14 | - | TSS region | transcription start site region 42409 | |
Tssr42410 | 4 | 34 | - | TSS region | transcription start site region 42410 | |
Tssr42411 | 4 | 3 | - | TSS region | transcription start site region 42411 | |
Tssr37781 | 4 | 13 | + | TSS region | transcription start site region 37781 | |
Tssr37782 | 4 | 41 | + | TSS region | transcription start site region 37782 | |
Tssr37783 | 4 | 10 | + | TSS region | transcription start site region 37783 | |
Tssr37784 | 4 | 4 | + | TSS region | transcription start site region 37784 | |
Cdkn2b | 4 | 4740 | - | protein coding gene | cyclin dependent kinase inhibitor 2B | |
Cpgi14440 | 4 | 480 | CpG island | CpG island 14440 | ||
Cpgi14441 | 4 | 846 | CpG island | CpG island 14441 | ||
Tssr42412 | 4 | 56 | - | TSS region | transcription start site region 42412 | |
Tssr42413 | 4 | 4 | - | TSS region | transcription start site region 42413 | |
D4Mit300 | 4 | 123 | DNA segment | DNA Segment, Chr 4, Massachusetts Institute of Technology 300 | ||
Gm12609 | 4 | 17923 | + | unclassified non-coding RNA gene | predicted gene 12609 | |
D4Mit245 | 4 | 116 | DNA segment | DNA segment, Chr 4, Massachusetts Institute of Technology 245 | ||
Gm12610 | 4 | 41639 | + | lncRNA gene | predicted gene 12610 | |
D4Dcr11 | 4 | 104 | DNA segment | DNA Segment, Chr 4, Derry C. Roopenian 11 | ||
Gm12608 | 4 | 2372 | - | pseudogene | predicted gene 12608 | |
Gm27580 | 4 | 148 | + | unclassified non-coding RNA gene | predicted gene, 27580 | |
Tssr1229 | 4 | 1 | + | TSS region | transcription start site region 1229 | |
Tssr37785 | 4 | 5 | + | TSS region | transcription start site region 37785 | |
Abd1 | 4 | -27350091 | QTL | autoimmune biliary disease 1 | ||
Lvrq8 | 4 | -51677060 | QTL | liver weight QTL 8 | ||
W6q13 | 4 | -51677060 | QTL | weight 6 weeks QTL 13 | ||
W3q17 | 4 | -51677060 | QTL | weight 3 weeks QTL 17 | ||
W10q10 | 4 | -51677060 | QTL | weight 10 weeks QTL 10 | ||
Bmd7 | 4 | -62506261 | QTL | bone mineral density 7 |