Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:87050780-88111308

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55 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Slc24a2 4 86983124 to 87230477 247353 - protein coding gene solute carrier family 24 (sodium/potassium/calcium exchanger), member 2
Cpgi14426 4 87056592 to 87056845 253 CpG island CpG island 14426
Tssr42352 4 87073269 to 87073274 5 - TSS region transcription start site region 42352
Gm34039 4 87100404 to 87104926 4522 + pseudogene predicted gene, 34039
Pgia27 4 87148990 to 87149227 237 QTL proteoglycan induced arthritis 27
D4Mit45 4 87148990 to 87149227 237 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 45
Tssr42353 4 87161618 to 87161629 11 - TSS region transcription start site region 42353
Tssr42354 4 87161681 to 87161692 11 - TSS region transcription start site region 42354
Tssr42355 4 87226771 to 87226775 4 - TSS region transcription start site region 42355
Tssr42356 4 87227590 to 87227596 6 - TSS region transcription start site region 42356
Cpgi14427 4 87229676 to 87230836 1160 CpG island CpG island 14427
Tssr1223 4 87230021 to 87230032 11 - TSS region transcription start site region 1223
Tssr1224 4 87230033 to 87230060 27 - TSS region transcription start site region 1224
Tssr1225 4 87230097 to 87230110 13 - TSS region transcription start site region 1225
Tssr42357 4 87230414 to 87230432 18 - TSS region transcription start site region 42357
Tssr42358 4 87230435 to 87230476 41 - TSS region transcription start site region 42358
Tssr42359 4 87230491 to 87230501 10 - TSS region transcription start site region 42359
Gm12600 4 87298362 to 87301270 2908 + lincRNA gene predicted gene 12600
Gm23154 4 87432272 to 87432336 64 + miRNA gene predicted gene, 23154
D4Dcr9 4 87476076 to 87476171 95 DNA segment DNA Segment, Chr 4, Derry C. Roopenian 9
Gm34180 4 87530893 to 87668521 137628 - lncRNA gene predicted gene, 34180
Gm12604 4 87580780 to 87581308 528 + pseudogene predicted gene 12604
Tssr37761 4 87718445 to 87718451 6 + TSS region transcription start site region 37761
Mllt3 4 87769925 to 88033364 263439 - protein coding gene myeloid/lymphoid or mixed-lineage leukemia; translocated to, 3
D4Mit349 4 87792890 to 87792964 74 DNA segment DNA Segment, Chr 4, Massachusetts Institute of Technology 349
4832441B07Rik 4 87797091 to 87798689 1598 unclassified gene RIKEN cDNA 4832441B07 gene
D4Dcr10 4 87803407 to 87803508 101 DNA segment DNA Segment, Chr 4, Derry C. Roopenian 10
Tssr42360 4 87806263 to 87806274 11 - TSS region transcription start site region 42360
Tssr42361 4 87806276 to 87806292 16 - TSS region transcription start site region 42361
Tssr42362 4 87806296 to 87806325 29 - TSS region transcription start site region 42362
Tssr42363 4 87806332 to 87806345 13 - TSS region transcription start site region 42363
Tssr1226 4 87806346 to 87806353 7 - TSS region transcription start site region 1226
Tssr42364 4 87829519 to 87829524 5 - TSS region transcription start site region 42364
Tssr42365 4 87881737 to 87881762 25 - TSS region transcription start site region 42365
Tssr42366 4 87944663 to 87944667 4 - TSS region transcription start site region 42366
Gm34232 4 87974620 to 87985631 11011 - lncRNA gene predicted gene, 34232
Tssr42367 4 87983282 to 87983306 24 - TSS region transcription start site region 42367
Tssr42368 4 87986262 to 87986266 4 - TSS region transcription start site region 42368
Tssr42369 4 88001710 to 88001732 22 - TSS region transcription start site region 42369
Tssr42370 4 88019527 to 88019531 4 - TSS region transcription start site region 42370
Cpgi14428 4 88031239 to 88033791 2552 CpG island CpG island 14428
Tssr42371 4 88031700 to 88031732 32 - TSS region transcription start site region 42371
Tssr42372 4 88032735 to 88032749 14 - TSS region transcription start site region 42372
Tssr42373 4 88032769 to 88032802 33 - TSS region transcription start site region 42373
Tssr42374 4 88032805 to 88032822 17 - TSS region transcription start site region 42374
Tssr42375 4 88032839 to 88032863 24 - TSS region transcription start site region 42375
Tssr42376 4 88033277 to 88033288 11 - TSS region transcription start site region 42376
Tssr42377 4 88033289 to 88033315 26 - TSS region transcription start site region 42377
Tssr42378 4 88033328 to 88033373 45 - TSS region transcription start site region 42378
Gm12631 4 88033501 to 88034998 1497 + antisense lncRNA gene predicted gene 12631
Gm12646 4 88043804 to 88044041 237 + pseudogene predicted gene 12646
Cpgi14429 4 88094356 to 88095263 907 CpG island CpG island 14429
Tssr37762 4 88094599 to 88094653 54 + TSS region transcription start site region 37762
Focad 4 88094630 to 88411011 316381 + protein coding gene focadhesin
Tssr37763 4 88094660 to 88094672 12 + TSS region transcription start site region 37763