Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:86668635-86828645

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33 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cocrb5 4 86648386 to 86670060 21674 QTL cocaine related behavior 5
Plin2 4 86648386 to 86670060 21674 - protein coding gene perilipin 2
Tssr42336 4 86668702 to 86668743 41 - TSS region transcription start site region 42336
Tssr42337 4 86669450 to 86669461 11 - TSS region transcription start site region 42337
Tssr42338 4 86669472 to 86669485 13 - TSS region transcription start site region 42338
Tssr42339 4 86669492 to 86669507 15 - TSS region transcription start site region 42339
Cpgi14420 4 86669909 to 86670174 265 CpG island CpG island 14420
Tssr42340 4 86669986 to 86670025 39 - TSS region transcription start site region 42340
Tssr42341 4 86670030 to 86670043 13 - TSS region transcription start site region 42341
Tssr37738 4 86670193 to 86670204 11 + TSS region transcription start site region 37738
Tssr1221 4 86670249 to 86670253 4 + TSS region transcription start site region 1221
Tssr42342 4 86672399 to 86672404 5 - TSS region transcription start site region 42342
Tssr42343 4 86672558 to 86672563 5 - TSS region transcription start site region 42343
Tssr37739 4 86689598 to 86689605 7 + TSS region transcription start site region 37739
Tssr42344 4 86691440 to 86691450 10 - TSS region transcription start site region 42344
Tssr42345 4 86691464 to 86691480 16 - TSS region transcription start site region 42345
Gm42312 4 86710969 to 86743814 32845 + lncRNA gene predicted gene, 42312
Tssr37740 4 86711089 to 86711114 25 + TSS region transcription start site region 37740
Tssr37741 4 86711138 to 86711151 13 + TSS region transcription start site region 37741
Gm6521 4 86747526 to 86752316 4790 unclassified gene predicted gene 6521
Cpgi14421 4 86748294 to 86749353 1059 CpG island CpG island 14421
Tssr37742 4 86748526 to 86748558 32 + TSS region transcription start site region 37742
Dennd4c 4 86748555 to 86850603 102048 + protein coding gene DENN/MADD domain containing 4C
Tssr37743 4 86748561 to 86748572 11 + TSS region transcription start site region 37743
Tssr37744 4 86748583 to 86748598 15 + TSS region transcription start site region 37744
Tssr37745 4 86748618 to 86748623 5 + TSS region transcription start site region 37745
Tssr37746 4 86748635 to 86748645 10 + TSS region transcription start site region 37746
Tssr37747 4 86748851 to 86748862 11 + TSS region transcription start site region 37747
Tssr42346 4 86749396 to 86749410 14 - TSS region transcription start site region 42346
4833420L08Rik 4 86768487 to 86769802 1315 unclassified gene RIKEN cDNA 4833420L08 gene
Tssr1222 4 86796565 to 86796568 3 + TSS region transcription start site region 1222
Gm12630 4 86817794 to 86818577 783 - pseudogene predicted gene 12630
Tssr37748 4 86823904 to 86823910 6 + TSS region transcription start site region 37748