Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:85274172-86668385

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69 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Nmf191 4 53550839 to 86450248 32899409 heritable phenotypic marker neuroscience mutagenesis facility, 191
Sh3gl2 4 85205456 to 85389380 183924 + protein coding gene SH3-domain GRB2-like 2
Tssr42320 4 85373240 to 85373243 3 - TSS region transcription start site region 42320
Tssr37713 4 85379330 to 85379347 17 + TSS region transcription start site region 37713
Tssr37714 4 85388095 to 85388106 11 + TSS region transcription start site region 37714
Tssr37715 4 85388130 to 85388142 12 + TSS region transcription start site region 37715
Tssr37716 4 85388224 to 85388239 15 + TSS region transcription start site region 37716
Tssr37717 4 85388264 to 85388285 21 + TSS region transcription start site region 37717
Tssr37718 4 85388818 to 85388822 4 + TSS region transcription start site region 37718
Tssr37719 4 85413991 to 85413996 5 + TSS region transcription start site region 37719
D4Mit302 4 85504232 to 85504339 107 DNA segment DNA Segment, Chr 4, Massachusetts Institute of Technology 302
Cpgi14413 4 85514143 to 85514698 555 CpG island CpG island 14413
Adamtsl1 4 85514172 to 86428385 914213 + protein coding gene ADAMTS-like 1
Tssr37720 4 85514283 to 85514292 9 + TSS region transcription start site region 37720
Tssr37721 4 85514301 to 85514342 41 + TSS region transcription start site region 37721
Tssr37722 4 85514350 to 85514364 14 + TSS region transcription start site region 37722
Gm26069 4 85909911 to 85910187 276 + unclassified non-coding RNA gene predicted gene, 26069
Gm8949 4 85921109 to 85921944 835 - pseudogene predicted gene 8949
Gm25811 4 86043394 to 86043494 100 - snRNA gene predicted gene, 25811
Tssr37723 4 86053659 to 86053681 22 + TSS region transcription start site region 37723
Tssr37724 4 86053687 to 86053721 34 + TSS region transcription start site region 37724
Tssr37725 4 86053887 to 86053987 100 + TSS region transcription start site region 37725
Tssr37726 4 86053994 to 86054012 18 + TSS region transcription start site region 37726
D4Ertd103e 4 86220521 to 86220720 199 DNA segment DNA segment, Chr 4, ERATO Doi 103, expressed
Cpgi14414 4 86276893 to 86277201 308 CpG island CpG island 14414
Cpgi14415 4 86342052 to 86342335 283 CpG island CpG island 14415
Cpgi14416 4 86342871 to 86343112 241 CpG island CpG island 14416
Gm33730 4 86421254 to 86440949 19695 - lncRNA gene predicted gene, 33730
Cpgi14417 4 86426495 to 86426725 230 CpG island CpG island 14417
Gm12550 4 86442013 to 86442341 328 - pseudogene predicted gene 12550
Saxo1 4 86444641 to 86558328 113687 - protein coding gene stabilizer of axonemal microtubules 1
D4Mit327 4 86450143 to 86450248 105 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 327
Gm26017 4 86509152 to 86509225 73 + snRNA gene predicted gene, 26017
D4Dcr8 4 86549811 to 86549907 96 DNA segment DNA Segment, Chr 4, Derry C. Roopenian 8
Tssr42321 4 86558266 to 86558307 41 - TSS region transcription start site region 42321
Tssr42322 4 86558310 to 86558332 22 - TSS region transcription start site region 42322
Tssr1220 4 86558394 to 86558398 4 + TSS region transcription start site region 1220
Tssr37727 4 86558430 to 86558448 18 + TSS region transcription start site region 37727
Saxo1os 4 86558446 to 86559804 1358 + antisense lncRNA gene stabilizer of axonemal microtubules 1, opposite strand
Cpgi14418 4 86575313 to 86576610 1297 CpG island CpG island 14418
Tssr37728 4 86575668 to 86575689 21 + TSS region transcription start site region 37728
Rraga 4 86575673 to 86577285 1612 + protein coding gene Ras-related GTP binding A
Tssr37729 4 86575696 to 86575718 22 + TSS region transcription start site region 37729
Tssr37730 4 86575720 to 86575731 11 + TSS region transcription start site region 37730
Tssr37731 4 86575740 to 86575751 11 + TSS region transcription start site region 37731
Tssr37732 4 86575783 to 86575794 11 + TSS region transcription start site region 37732
Tssr37733 4 86575796 to 86575807 11 + TSS region transcription start site region 37733
Tssr37734 4 86576910 to 86576921 11 + TSS region transcription start site region 37734
Tssr37735 4 86577103 to 86577116 13 + TSS region transcription start site region 37735
Haus6 4 86578855 to 86612055 33200 - protein coding gene HAUS augmin-like complex, subunit 6
Tssr42323 4 86581796 to 86581800 4 - TSS region transcription start site region 42323
Scarna8 4 86586453 to 86586570 117 - snoRNA gene small Cajal body-specific RNA 8
Cpgi14419 4 86611463 to 86612239 776 CpG island CpG island 14419
Tssr42324 4 86611962 to 86611973 11 - TSS region transcription start site region 42324
Tssr42325 4 86611987 to 86612001 14 - TSS region transcription start site region 42325
Tssr42326 4 86612009 to 86612062 53 - TSS region transcription start site region 42326
Gm12551 4 86627075 to 86631251 4176 - pseudogene predicted gene 12551
Tssr42327 4 86633160 to 86633165 5 - TSS region transcription start site region 42327
Tssr42328 4 86648203 to 86648214 11 - TSS region transcription start site region 42328
Cocrb5 4 86648386 to 86670060 21674 QTL cocaine related behavior 5
Plin2 4 86648386 to 86670060 21674 - protein coding gene perilipin 2
Tssr42329 4 86655503 to 86655519 16 - TSS region transcription start site region 42329
Tssr42330 4 86655520 to 86655531 11 - TSS region transcription start site region 42330
Tssr42331 4 86656152 to 86656164 12 - TSS region transcription start site region 42331
Tssr42332 4 86657023 to 86657048 25 - TSS region transcription start site region 42332
Tssr37736 4 86657258 to 86657317 59 + TSS region transcription start site region 37736
Tssr42333 4 86657369 to 86657387 18 - TSS region transcription start site region 42333
Tssr37737 4 86658606 to 86658635 29 + TSS region transcription start site region 37737
Tssr42334 4 86660164 to 86660254 90 - TSS region transcription start site region 42334