Gene symbol | Chromo- some |
Coordinates (bp, mm10) | Size (bp) | Strand | Feature Type | Gene name |
---|---|---|---|---|---|---|
Whl | 4 | 1147334 | heritable phenotypic marker | wheels | ||
Cpgi14005 | 4 | 1049 | CpG island | CpG island 14005 | ||
Rab2a | 4 | 72115 | + | protein coding gene | RAB2A, member RAS oncogene family | |
Tssr36410 | 4 | 113 | + | TSS region | transcription start site region 36410 | |
Tssr36411 | 4 | 9 | + | TSS region | transcription start site region 36411 | |
Tssr36412 | 4 | 33 | + | TSS region | transcription start site region 36412 | |
Tssr36413 | 4 | 4 | + | TSS region | transcription start site region 36413 | |
D130047N11Rik | 4 | 3551 | unclassified gene | RIKEN cDNA D130047N11 gene | ||
C530036F05Rik | 4 | 2719 | unclassified gene | RIKEN cDNA C530036F05 gene | ||
Tssr1114 | 4 | 2 | + | TSS region | transcription start site region 1114 | |
Gm42253 | 4 | 11116 | - | lncRNA gene | predicted gene, 42253 | |
Tssr40887 | 4 | 4 | - | TSS region | transcription start site region 40887 | |
Cpgi14006 | 4 | 891 | CpG island | CpG island 14006 | ||
Gm8273 | 4 | 2118 | - | unclassified gene | predicted gene 8273 | |
Cpgi14007 | 4 | 500 | CpG island | CpG island 14007 | ||
Tssr40888 | 4 | 21 | - | TSS region | transcription start site region 40888 | |
Gm11809 | 4 | 946 | - | pseudogene | predicted gene 11809 | |
Tssr40889 | 4 | 9 | - | TSS region | transcription start site region 40889 | |
Cpgi14008 | 4 | 2741 | CpG island | CpG island 14008 | ||
Tssr36414 | 4 | 54 | + | TSS region | transcription start site region 36414 | |
Chd7 | 4 | 177253 | + | protein coding gene | chromodomain helicase DNA binding protein 7 | |
Tssr36415 | 4 | 46 | + | TSS region | transcription start site region 36415 | |
Tssr36416 | 4 | 77 | + | TSS region | transcription start site region 36416 | |
Tssr36417 | 4 | 3 | + | TSS region | transcription start site region 36417 | |
Gm46841 | 4 | 10978 | + | protein coding gene | predicted gene, 46841 | |
Tssr36418 | 4 | 3 | + | TSS region | transcription start site region 36418 | |
Tssr36419 | 4 | 11 | + | TSS region | transcription start site region 36419 | |
Tssr36420 | 4 | 17 | + | TSS region | transcription start site region 36420 | |
Tssr36421 | 4 | 116 | + | TSS region | transcription start site region 36421 | |
Tssr1115 | 4 | 11 | + | TSS region | transcription start site region 1115 | |
Cpgi14009 | 4 | 558 | CpG island | CpG island 14009 | ||
Tssr36422 | 4 | 21 | + | TSS region | transcription start site region 36422 | |
Tssr36423 | 4 | 7 | + | TSS region | transcription start site region 36423 | |
Tssr36424 | 4 | 37 | + | TSS region | transcription start site region 36424 | |
Tssr36425 | 4 | 25 | + | TSS region | transcription start site region 36425 | |
Tssr36426 | 4 | 14 | + | TSS region | transcription start site region 36426 | |
Tssr36427 | 4 | 7 | + | TSS region | transcription start site region 36427 | |
Tssr36428 | 4 | 11 | + | TSS region | transcription start site region 36428 | |
Tssr36429 | 4 | 16 | + | TSS region | transcription start site region 36429 | |
Tssr36430 | 4 | 1 | + | TSS region | transcription start site region 36430 | |
Tssr36431 | 4 | 11 | + | TSS region | transcription start site region 36431 | |
Tssr36432 | 4 | 14 | + | TSS region | transcription start site region 36432 | |
Tssr36433 | 4 | 19 | + | TSS region | transcription start site region 36433 | |
Tssr36434 | 4 | 9 | + | TSS region | transcription start site region 36434 | |
Tssr36435 | 4 | 19 | + | TSS region | transcription start site region 36435 | |
Tssr1116 | 4 | 4 | + | TSS region | transcription start site region 1116 | |
Tssr40890 | 4 | 7 | - | TSS region | transcription start site region 40890 | |
Tssr36436 | 4 | 22 | + | TSS region | transcription start site region 36436 | |
Tssr36437 | 4 | 9 | + | TSS region | transcription start site region 36437 | |
Tssr40891 | 4 | 10 | - | TSS region | transcription start site region 40891 | |
Tssr36438 | 4 | 12 | + | TSS region | transcription start site region 36438 | |
Tssr36439 | 4 | 26 | + | TSS region | transcription start site region 36439 | |
Tssr36440 | 4 | 11 | + | TSS region | transcription start site region 36440 | |
Tssr36441 | 4 | 14 | + | TSS region | transcription start site region 36441 | |
Tssr36442 | 4 | 13 | + | TSS region | transcription start site region 36442 | |
Tssr36443 | 4 | 26 | + | TSS region | transcription start site region 36443 | |
Tssr36444 | 4 | 10 | + | TSS region | transcription start site region 36444 | |
Tssr36445 | 4 | 4 | + | TSS region | transcription start site region 36445 | |
Tssr36446 | 4 | 3 | + | TSS region | transcription start site region 36446 | |
Tssr1117 | 4 | 3 | + | TSS region | transcription start site region 1117 | |
Tssr36447 | 4 | 6 | + | TSS region | transcription start site region 36447 | |
Cpgi14010 | 4 | 772 | CpG island | CpG island 14010 | ||
Gm46842 | 4 | 8717 | - | lncRNA gene | predicted gene, 46842 | |
D4Mit360 | 4 | 112 | DNA segment | DNA Segment, Chr 4, Massachusetts Institute of Technology-360 | ||
Cpgi14011 | 4 | 825 | CpG island | CpG island 14011 | ||
Tssr40892 | 4 | 32 | - | TSS region | transcription start site region 40892 | |
Tssr36448 | 4 | 11 | + | TSS region | transcription start site region 36448 | |
Tssr36449 | 4 | 10 | + | TSS region | transcription start site region 36449 | |
Tssr40893 | 4 | 3 | - | TSS region | transcription start site region 40893 | |
Tssr36450 | 4 | 34 | + | TSS region | transcription start site region 36450 | |
Tssr36451 | 4 | 36 | + | TSS region | transcription start site region 36451 | |
Cpgi14012 | 4 | 282 | CpG island | CpG island 14012 | ||
Tssr40894 | 4 | 25 | - | TSS region | transcription start site region 40894 | |
Tssr1118 | 4 | 11 | + | TSS region | transcription start site region 1118 | |
Tssr36452 | 4 | 19 | + | TSS region | transcription start site region 36452 | |
Rps18-ps2 | 4 | 397 | + | pseudogene | ribosomal protein S18, pseudogene 2 | |
Tssr40895 | 4 | 2 | - | TSS region | transcription start site region 40895 | |
Gm34428 | 4 | 2503 | - | lncRNA gene | predicted gene, 34428 | |
Cpgi14013 | 4 | 502 | CpG island | CpG island 14013 | ||
Gm34288 | 4 | 13963 | - | lncRNA gene | predicted gene, 34288 | |
Cpgi14014 | 4 | 172 | CpG island | CpG island 14014 | ||
Gm23423 | 4 | 105 | + | snRNA gene | predicted gene, 23423 | |
Gm26548 | 4 | 2592 | - | lincRNA gene | predicted gene, 26548 | |
Tssr36453 | 4 | 50 | + | TSS region | transcription start site region 36453 | |
Clvs1 | 4 | 182398 | + | protein coding gene | clavesin 1 | |
Cpgi14015 | 4 | 505 | CpG island | CpG island 14015 | ||
Tssr36454 | 4 | 24 | + | TSS region | transcription start site region 36454 | |
Gm11816 | 4 | 3419 | - | antisense lncRNA gene | predicted gene 11816 | |
Tssr40896 | 4 | 33 | - | TSS region | transcription start site region 40896 | |
D4Mit317 | 4 | 92 | DNA segment | DNA segment, Chr 4, Massachusetts Institute of Technology 317 | ||
Cpgi14016 | 4 | 208 | CpG island | CpG island 14016 | ||
D130060J02Rik | 4 | 5596 | unclassified non-coding RNA gene | RIKEN cDNA D130060J02 gene | ||
Bbaa13 | 4 | 124 | QTL | B.burgdorferi-associated arthritis 13 | ||
Ksc2 | 4 | 178530 | QTL | keratinocyte stem cell locus 2 | ||
D4Mit264 | 4 | 124 | DNA segment | DNA segment, Chr 4, Massachusetts Institute of Technology 264 | ||
Gm11817 | 4 | 15238 | - | antisense lncRNA gene | predicted gene 11817 | |
Asph | 4 | 220259 | - | protein coding gene | aspartate-beta-hydroxylase | |
Tssr40897 | 4 | 6 | - | TSS region | transcription start site region 40897 | |
Cpgi14017 | 4 | 242 | CpG island | CpG island 14017 | ||
Tssr40898 | 4 | 9 | - | TSS region | transcription start site region 40898 | |
D4Mit263 | 4 | 109 | DNA segment | DNA segment, Chr 4, Massachusetts Institute of Technology 263 | ||
Gm19130 | 4 | 530 | - | pseudogene | predicted gene, 19130 | |
D4Mit181 | 4 | 132 | DNA segment | DNA segment, Chr 4, Massachusetts Institute of Technology 181 | ||
Tssr40899 | 4 | 36 | - | TSS region | transcription start site region 40899 | |
Tssr40900 | 4 | 34 | - | TSS region | transcription start site region 40900 | |
Tssr40901 | 4 | 11 | - | TSS region | transcription start site region 40901 | |
Tssr40902 | 4 | 76 | - | TSS region | transcription start site region 40902 | |
Tssr40903 | 4 | 3 | - | TSS region | transcription start site region 40903 | |
Tssr40904 | 4 | 4 | - | TSS region | transcription start site region 40904 | |
Tssr40905 | 4 | 11 | - | TSS region | transcription start site region 40905 | |
Cpgi14018 | 4 | 1091 | CpG island | CpG island 14018 | ||
Tssr40906 | 4 | 45 | - | TSS region | transcription start site region 40906 | |
Gm25677 | 4 | 71 | + | miRNA gene | predicted gene, 25677 | |
Gm24152 | 4 | 162 | - | snRNA gene | predicted gene, 24152 | |
D4Mit101 | 4 | 102 | DNA segment | DNA segment, Chr 4, Massachusetts Institute of Technology 101 | ||
Gm34947 | 4 | 3041 | + | lncRNA gene | predicted gene, 34947 | |
Cpgi14019 | 4 | 585 | CpG island | CpG island 14019 | ||
4930412C18Rik | 4 | 52826 | + | lncRNA gene | RIKEN cDNA 4930412C18 gene | |
Tssr36455 | 4 | 64 | + | TSS region | transcription start site region 36455 | |
Cpgi14020 | 4 | 195 | CpG island | CpG island 14020 | ||
Cpgi14021 | 4 | 185 | CpG island | CpG island 14021 | ||
Gm42254 | 4 | 10059 | - | lncRNA gene | predicted gene, 42254 | |
Cpgi14022 | 4 | 205 | CpG island | CpG island 14022 | ||
Cpgi14023 | 4 | 1290 | CpG island | CpG island 14023 | ||
Tssr36456 | 4 | 19 | + | TSS region | transcription start site region 36456 | |
Gdf6 | 4 | 17973 | + | protein coding gene | growth differentiation factor 6 | |
Cpgi14024 | 4 | 881 | CpG island | CpG island 14024 | ||
Cpgi14025 | 4 | 1291 | CpG island | CpG island 14025 | ||
Cpgi14026 | 4 | 342 | CpG island | CpG island 14026 | ||
4930448K20Rik | 4 | 1432 | - | pseudogene | RIKEN cDNA 4930448K20 gene | |
Tssr40907 | 4 | 23 | - | TSS region | transcription start site region 40907 | |
Tssr36457 | 4 | 2 | + | TSS region | transcription start site region 36457 | |
Gm11834 | 4 | 922 | + | pseudogene | predicted gene 11834 | |
Gm11835 | 4 | 662 | + | pseudogene | predicted gene 11835 | |
D4Mit227 | 4 | 180 | DNA segment | DNA segment, Chr 4, Massachusetts Institute of Technology 227 | ||
Gm35008 | 4 | 10629 | + | lncRNA gene | predicted gene, 35008 | |
Gm46879 | 4 | 17222 | - | lncRNA gene | predicted gene, 46879 | |
Gm11814 | 4 | 928 | - | pseudogene | predicted gene 11814 | |
Gm11815 | 4 | 1406 | - | lincRNA gene | predicted gene 11815 | |
1700123O12Rik | 4 | 289771 | - | lincRNA gene | RIKEN cDNA 1700123O12 gene | |
Gm11813 | 4 | 290 | + | pseudogene | predicted gene 11813 | |
Tssr40908 | 4 | 10 | - | TSS region | transcription start site region 40908 | |
Tssr40909 | 4 | 7 | - | TSS region | transcription start site region 40909 | |
Gm12920 | 4 | 1185 | + | pseudogene | predicted gene 12920 | |
Mir3471-1 | 4 | 130 | - | miRNA gene | microRNA 3471-1 | |
Gm12918 | 4 | 635 | + | pseudogene | predicted gene 12918 | |
Gm12919 | 4 | 1593 | + | pseudogene | predicted gene 12919 | |
Cpgi14027 | 4 | 1116 | CpG island | CpG island 14027 | ||
n-TSaga9 | 4 | 81 | + | tRNA gene | nuclear encoded tRNA serine 9 (anticodon AGA) | |
2610301B20Rik | 4 | 24927 | + | protein coding gene | RIKEN cDNA 2610301B20 gene | |
Tssr1119 | 4 | 19 | + | TSS region | transcription start site region 1119 | |
Tssr36458 | 4 | 69 | + | TSS region | transcription start site region 36458 | |
Tssr36459 | 4 | 3 | + | TSS region | transcription start site region 36459 | |
Tssr36460 | 4 | 11 | + | TSS region | transcription start site region 36460 | |
Tssr36461 | 4 | 14 | + | TSS region | transcription start site region 36461 | |
Rps11-ps3 | 4 | 485 | + | pseudogene | ribosomal protein S11, pseudogene 3 | |
Gm2401 | 4 | 2575 | + | pseudogene | predicted gene 2401 | |
Tssr40910 | 4 | 1 | - | TSS region | transcription start site region 40910 | |
Plekhf2 | 4 | 18957 | - | protein coding gene | pleckstrin homology domain containing, family F (with FYVE domain) member 2 | |
Tssr40911 | 4 | 5 | - | TSS region | transcription start site region 40911 | |
Tssr40912 | 4 | 4 | - | TSS region | transcription start site region 40912 | |
Cpgi14028 | 4 | 1301 | CpG island | CpG island 14028 | ||
Tssr40913 | 4 | 11 | - | TSS region | transcription start site region 40913 | |
Tssr40914 | 4 | 93 | - | TSS region | transcription start site region 40914 | |
Tssr40915 | 4 | 20 | - | TSS region | transcription start site region 40915 | |
Gm46843 | 4 | 16251 | - | lncRNA gene | predicted gene, 46843 | |
Gm35429 | 4 | 18072 | - | lncRNA gene | predicted gene, 35429 | |
Ndufaf6 | 4 | 25160 | - | protein coding gene | NADH:ubiquinone oxidoreductase complex assembly factor 6 | |
Cpgi14029 | 4 | 737 | CpG island | CpG island 14029 | ||
Tssr40916 | 4 | 51 | - | TSS region | transcription start site region 40916 | |
Tssr1120 | 4 | 2 | + | TSS region | transcription start site region 1120 | |
Gm11827 | 4 | 3648 | + | lincRNA gene | predicted gene 11827 | |
Tssr36462 | 4 | 30 | + | TSS region | transcription start site region 36462 | |
Gm11829 | 4 | 281 | + | pseudogene | predicted gene 11829 | |
Mir684-2 | 4 | 85 | + | miRNA gene | microRNA 684-2 | |
Gm11830 | 4 | 560 | + | pseudogene | predicted gene 11830 | |
Tssr40917 | 4 | 13 | - | TSS region | transcription start site region 40917 | |
Tssr36463 | 4 | 18 | + | TSS region | transcription start site region 36463 | |
Cpgi14030 | 4 | 972 | CpG island | CpG island 14030 | ||
Tssr40918 | 4 | 15 | - | TSS region | transcription start site region 40918 | |
Tssr40919 | 4 | 16 | - | TSS region | transcription start site region 40919 | |
Tssr36464 | 4 | 42 | + | TSS region | transcription start site region 36464 | |
Trp53inp1 | 4 | 17936 | + | protein coding gene | transformation related protein 53 inducible nuclear protein 1 | |
Tssr36465 | 4 | 15 | + | TSS region | transcription start site region 36465 | |
Tssr36466 | 4 | 13 | + | TSS region | transcription start site region 36466 | |
Tssr36467 | 4 | 9 | + | TSS region | transcription start site region 36467 | |
Tssr36468 | 4 | 5 | + | TSS region | transcription start site region 36468 | |
Tssr36469 | 4 | 27 | + | TSS region | transcription start site region 36469 | |
Tssr36470 | 4 | 9 | + | TSS region | transcription start site region 36470 | |
Tssr36471 | 4 | 29 | + | TSS region | transcription start site region 36471 | |
Tssr36472 | 4 | 66 | + | TSS region | transcription start site region 36472 | |
Tssr36473 | 4 | 49 | + | TSS region | transcription start site region 36473 | |
A630034I12Rik | 4 | 15268 | - | lncRNA gene | RIKEN cDNA A630034I12 gene | |
Cpgi14031 | 4 | 2153 | CpG island | CpG island 14031 | ||
Tssr40920 | 4 | 19 | - | TSS region | transcription start site region 40920 | |
Ccne2 | 4 | 13428 | + | protein coding gene | cyclin E2 | |
Tssr36474 | 4 | 7 | + | TSS region | transcription start site region 36474 | |
Tssr36475 | 4 | 13 | + | TSS region | transcription start site region 36475 | |
Ints8 | 4 | 55100 | - | protein coding gene | integrator complex subunit 8 | |
Tssr36476 | 4 | 3 | + | TSS region | transcription start site region 36476 |