Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:84398991-86428996

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69 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Bnc2 4 84275095 to 84675275 400180 - protein coding gene basonuclin 2
Gm12421 4 84428818 to 84429124 306 - pseudogene predicted gene 12421
Tssr37698 4 84429454 to 84429472 18 + TSS region transcription start site region 37698
Tssr42310 4 84456182 to 84456199 17 - TSS region transcription start site region 42310
Tssr42311 4 84518564 to 84518569 5 - TSS region transcription start site region 42311
Tssr42312 4 84532255 to 84532256 1 - TSS region transcription start site region 42312
Cpgi14409 4 84545201 to 84546035 834 CpG island CpG island 14409
Tssr42313 4 84546284 to 84546300 16 - TSS region transcription start site region 42313
Tssr42314 4 84546456 to 84546472 16 - TSS region transcription start site region 42314
Tssr42315 4 84548393 to 84548403 10 - TSS region transcription start site region 42315
Cpgi14410 4 84674153 to 84676229 2076 CpG island CpG island 14410
Tssr42316 4 84674989 to 84675006 17 - TSS region transcription start site region 42316
Tssr42317 4 84675376 to 84675394 18 - TSS region transcription start site region 42317
Tssr42318 4 84675396 to 84675411 15 - TSS region transcription start site region 42318
Tssr42319 4 84675413 to 84675428 15 - TSS region transcription start site region 42319
Tssr1219 4 84675693 to 84675730 37 - TSS region transcription start site region 1219
D4Jkn1 4 84688852 to 84688972 120 DNA segment DNA segment, Chr 4, Ian Jackson 1
Gm12420 4 84697863 to 84698910 1047 + pseudogene predicted gene 12420
Tssr37699 4 84698008 to 84698026 18 + TSS region transcription start site region 37699
Tssr37700 4 84698132 to 84698161 29 + TSS region transcription start site region 37700
Tssr37701 4 84698304 to 84698326 22 + TSS region transcription start site region 37701
Gm12415 4 84741475 to 84742291 816 + lincRNA gene predicted gene 12415
Cpgi14411 4 84883858 to 84885099 1241 CpG island CpG island 14411
Tssr37702 4 84884276 to 84884314 38 + TSS region transcription start site region 37702
Cntln 4 84884309 to 85131921 247612 + protein coding gene centlein, centrosomal protein
Tssr37703 4 84884366 to 84884407 41 + TSS region transcription start site region 37703
Tssr37704 4 84884418 to 84884457 39 + TSS region transcription start site region 37704
Gm12418 4 84915896 to 84916837 941 + pseudogene predicted gene 12418
Gm12419 4 84923554 to 84924189 635 - pseudogene predicted gene 12419
Gm2700 4 85176526 to 85177026 500 - pseudogene predicted gene 2700
Gm12417 4 85176527 to 85176929 402 + pseudogene predicted gene 12417
Cpgi14412 4 85205080 to 85206302 1222 CpG island CpG island 14412
Tssr37705 4 85205120 to 85205131 11 + TSS region transcription start site region 37705
Tssr37706 4 85205136 to 85205149 13 + TSS region transcription start site region 37706
Tssr37707 4 85205151 to 85205192 41 + TSS region transcription start site region 37707
Tssr37708 4 85205209 to 85205228 19 + TSS region transcription start site region 37708
Tssr37709 4 85205417 to 85205495 78 + TSS region transcription start site region 37709
Sh3gl2 4 85205456 to 85389380 183924 + protein coding gene SH3-domain GRB2-like 2
Tssr37710 4 85205503 to 85205516 13 + TSS region transcription start site region 37710
Tssr37711 4 85205518 to 85205522 4 + TSS region transcription start site region 37711
Tssr37712 4 85205675 to 85205685 10 + TSS region transcription start site region 37712
Gm12413 4 85245451 to 85245762 311 - pseudogene predicted gene 12413
Tssr42320 4 85373240 to 85373243 3 - TSS region transcription start site region 42320
Tssr37713 4 85379330 to 85379347 17 + TSS region transcription start site region 37713
Tssr37714 4 85388095 to 85388106 11 + TSS region transcription start site region 37714
Tssr37715 4 85388130 to 85388142 12 + TSS region transcription start site region 37715
Tssr37716 4 85388224 to 85388239 15 + TSS region transcription start site region 37716
Tssr37717 4 85388264 to 85388285 21 + TSS region transcription start site region 37717
Tssr37718 4 85388818 to 85388822 4 + TSS region transcription start site region 37718
Tssr37719 4 85413991 to 85413996 5 + TSS region transcription start site region 37719
D4Mit302 4 85504232 to 85504339 107 DNA segment DNA Segment, Chr 4, Massachusetts Institute of Technology 302
Cpgi14413 4 85514143 to 85514698 555 CpG island CpG island 14413
Adamtsl1 4 85514172 to 86428385 914213 + protein coding gene ADAMTS-like 1
Tssr37720 4 85514283 to 85514292 9 + TSS region transcription start site region 37720
Tssr37721 4 85514301 to 85514342 41 + TSS region transcription start site region 37721
Tssr37722 4 85514350 to 85514364 14 + TSS region transcription start site region 37722
Gm26069 4 85909911 to 85910187 276 + unclassified non-coding RNA gene predicted gene, 26069
Gm8949 4 85921109 to 85921944 835 - pseudogene predicted gene 8949
Gm25811 4 86043394 to 86043494 100 - snRNA gene predicted gene, 25811
Tssr37723 4 86053659 to 86053681 22 + TSS region transcription start site region 37723
Tssr37724 4 86053687 to 86053721 34 + TSS region transcription start site region 37724
Tssr37725 4 86053887 to 86053987 100 + TSS region transcription start site region 37725
Tssr37726 4 86053994 to 86054012 18 + TSS region transcription start site region 37726
D4Ertd103e 4 86220521 to 86220720 199 DNA segment DNA segment, Chr 4, ERATO Doi 103, expressed
Cpgi14414 4 86276893 to 86277201 308 CpG island CpG island 14414
Cpgi14415 4 86342052 to 86342335 283 CpG island CpG island 14415
Cpgi14416 4 86342871 to 86343112 241 CpG island CpG island 14416
Gm33730 4 86421254 to 86440949 19695 - lncRNA gene predicted gene, 33730
Cpgi14417 4 86426495 to 86426725 230 CpG island CpG island 14417