Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:84188991-86638996

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102 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Nmf191 4 53550839 to 86450248 32899409 heritable phenotypic marker neuroscience mutagenesis facility, 191
Gm33597 4 84133256 to 84220733 87477 - lncRNA gene predicted gene, 33597
Bnc2 4 84275095 to 84675275 400180 - protein coding gene basonuclin 2
Tssr42308 4 84357042 to 84357045 3 - TSS region transcription start site region 42308
Tssr42309 4 84383928 to 84383932 4 - TSS region transcription start site region 42309
Gm12421 4 84428818 to 84429124 306 - pseudogene predicted gene 12421
Tssr37698 4 84429454 to 84429472 18 + TSS region transcription start site region 37698
Tssr42310 4 84456182 to 84456199 17 - TSS region transcription start site region 42310
Tssr42311 4 84518564 to 84518569 5 - TSS region transcription start site region 42311
Tssr42312 4 84532255 to 84532256 1 - TSS region transcription start site region 42312
Cpgi14409 4 84545201 to 84546035 834 CpG island CpG island 14409
Tssr42313 4 84546284 to 84546300 16 - TSS region transcription start site region 42313
Tssr42314 4 84546456 to 84546472 16 - TSS region transcription start site region 42314
Tssr42315 4 84548393 to 84548403 10 - TSS region transcription start site region 42315
Cpgi14410 4 84674153 to 84676229 2076 CpG island CpG island 14410
Tssr42316 4 84674989 to 84675006 17 - TSS region transcription start site region 42316
Tssr42317 4 84675376 to 84675394 18 - TSS region transcription start site region 42317
Tssr42318 4 84675396 to 84675411 15 - TSS region transcription start site region 42318
Tssr42319 4 84675413 to 84675428 15 - TSS region transcription start site region 42319
Tssr1219 4 84675693 to 84675730 37 - TSS region transcription start site region 1219
D4Jkn1 4 84688852 to 84688972 120 DNA segment DNA segment, Chr 4, Ian Jackson 1
Gm12420 4 84697863 to 84698910 1047 + pseudogene predicted gene 12420
Tssr37699 4 84698008 to 84698026 18 + TSS region transcription start site region 37699
Tssr37700 4 84698132 to 84698161 29 + TSS region transcription start site region 37700
Tssr37701 4 84698304 to 84698326 22 + TSS region transcription start site region 37701
Gm12415 4 84741475 to 84742291 816 + lincRNA gene predicted gene 12415
Cpgi14411 4 84883858 to 84885099 1241 CpG island CpG island 14411
Tssr37702 4 84884276 to 84884314 38 + TSS region transcription start site region 37702
Cntln 4 84884309 to 85131921 247612 + protein coding gene centlein, centrosomal protein
Tssr37703 4 84884366 to 84884407 41 + TSS region transcription start site region 37703
Tssr37704 4 84884418 to 84884457 39 + TSS region transcription start site region 37704
Gm12418 4 84915896 to 84916837 941 + pseudogene predicted gene 12418
Gm12419 4 84923554 to 84924189 635 - pseudogene predicted gene 12419
Gm2700 4 85176526 to 85177026 500 - pseudogene predicted gene 2700
Gm12417 4 85176527 to 85176929 402 + pseudogene predicted gene 12417
Cpgi14412 4 85205080 to 85206302 1222 CpG island CpG island 14412
Tssr37705 4 85205120 to 85205131 11 + TSS region transcription start site region 37705
Tssr37706 4 85205136 to 85205149 13 + TSS region transcription start site region 37706
Tssr37707 4 85205151 to 85205192 41 + TSS region transcription start site region 37707
Tssr37708 4 85205209 to 85205228 19 + TSS region transcription start site region 37708
Tssr37709 4 85205417 to 85205495 78 + TSS region transcription start site region 37709
Sh3gl2 4 85205456 to 85389380 183924 + protein coding gene SH3-domain GRB2-like 2
Tssr37710 4 85205503 to 85205516 13 + TSS region transcription start site region 37710
Tssr37711 4 85205518 to 85205522 4 + TSS region transcription start site region 37711
Tssr37712 4 85205675 to 85205685 10 + TSS region transcription start site region 37712
Gm12413 4 85245451 to 85245762 311 - pseudogene predicted gene 12413
Tssr42320 4 85373240 to 85373243 3 - TSS region transcription start site region 42320
Tssr37713 4 85379330 to 85379347 17 + TSS region transcription start site region 37713
Tssr37714 4 85388095 to 85388106 11 + TSS region transcription start site region 37714
Tssr37715 4 85388130 to 85388142 12 + TSS region transcription start site region 37715
Tssr37716 4 85388224 to 85388239 15 + TSS region transcription start site region 37716
Tssr37717 4 85388264 to 85388285 21 + TSS region transcription start site region 37717
Tssr37718 4 85388818 to 85388822 4 + TSS region transcription start site region 37718
Tssr37719 4 85413991 to 85413996 5 + TSS region transcription start site region 37719
D4Mit302 4 85504232 to 85504339 107 DNA segment DNA Segment, Chr 4, Massachusetts Institute of Technology 302
Cpgi14413 4 85514143 to 85514698 555 CpG island CpG island 14413
Adamtsl1 4 85514172 to 86428385 914213 + protein coding gene ADAMTS-like 1
Tssr37720 4 85514283 to 85514292 9 + TSS region transcription start site region 37720
Tssr37721 4 85514301 to 85514342 41 + TSS region transcription start site region 37721
Tssr37722 4 85514350 to 85514364 14 + TSS region transcription start site region 37722
Gm26069 4 85909911 to 85910187 276 + unclassified non-coding RNA gene predicted gene, 26069
Gm8949 4 85921109 to 85921944 835 - pseudogene predicted gene 8949
Gm25811 4 86043394 to 86043494 100 - snRNA gene predicted gene, 25811
Tssr37723 4 86053659 to 86053681 22 + TSS region transcription start site region 37723
Tssr37724 4 86053687 to 86053721 34 + TSS region transcription start site region 37724
Tssr37725 4 86053887 to 86053987 100 + TSS region transcription start site region 37725
Tssr37726 4 86053994 to 86054012 18 + TSS region transcription start site region 37726
D4Ertd103e 4 86220521 to 86220720 199 DNA segment DNA segment, Chr 4, ERATO Doi 103, expressed
Cpgi14414 4 86276893 to 86277201 308 CpG island CpG island 14414
Cpgi14415 4 86342052 to 86342335 283 CpG island CpG island 14415
Cpgi14416 4 86342871 to 86343112 241 CpG island CpG island 14416
Gm33730 4 86421254 to 86440949 19695 - lncRNA gene predicted gene, 33730
Cpgi14417 4 86426495 to 86426725 230 CpG island CpG island 14417
Gm12550 4 86442013 to 86442341 328 - pseudogene predicted gene 12550
Saxo1 4 86444641 to 86558328 113687 - protein coding gene stabilizer of axonemal microtubules 1
D4Mit327 4 86450143 to 86450248 105 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 327
Gm26017 4 86509152 to 86509225 73 + snRNA gene predicted gene, 26017
D4Dcr8 4 86549811 to 86549907 96 DNA segment DNA Segment, Chr 4, Derry C. Roopenian 8
Tssr42321 4 86558266 to 86558307 41 - TSS region transcription start site region 42321
Tssr42322 4 86558310 to 86558332 22 - TSS region transcription start site region 42322
Tssr1220 4 86558394 to 86558398 4 + TSS region transcription start site region 1220
Tssr37727 4 86558430 to 86558448 18 + TSS region transcription start site region 37727
Saxo1os 4 86558446 to 86559804 1358 + antisense lncRNA gene stabilizer of axonemal microtubules 1, opposite strand
Cpgi14418 4 86575313 to 86576610 1297 CpG island CpG island 14418
Tssr37728 4 86575668 to 86575689 21 + TSS region transcription start site region 37728
Rraga 4 86575673 to 86577285 1612 + protein coding gene Ras-related GTP binding A
Tssr37729 4 86575696 to 86575718 22 + TSS region transcription start site region 37729
Tssr37730 4 86575720 to 86575731 11 + TSS region transcription start site region 37730
Tssr37731 4 86575740 to 86575751 11 + TSS region transcription start site region 37731
Tssr37732 4 86575783 to 86575794 11 + TSS region transcription start site region 37732
Tssr37733 4 86575796 to 86575807 11 + TSS region transcription start site region 37733
Tssr37734 4 86576910 to 86576921 11 + TSS region transcription start site region 37734
Tssr37735 4 86577103 to 86577116 13 + TSS region transcription start site region 37735
Haus6 4 86578855 to 86612055 33200 - protein coding gene HAUS augmin-like complex, subunit 6
Tssr42323 4 86581796 to 86581800 4 - TSS region transcription start site region 42323
Scarna8 4 86586453 to 86586570 117 - snoRNA gene small Cajal body-specific RNA 8
Cpgi14419 4 86611463 to 86612239 776 CpG island CpG island 14419
Tssr42324 4 86611962 to 86611973 11 - TSS region transcription start site region 42324
Tssr42325 4 86611987 to 86612001 14 - TSS region transcription start site region 42325
Tssr42326 4 86612009 to 86612062 53 - TSS region transcription start site region 42326
Gm12551 4 86627075 to 86631251 4176 - pseudogene predicted gene 12551
Tssr42327 4 86633160 to 86633165 5 - TSS region transcription start site region 42327