Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:83641350-84615289

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32 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ccdc171 4 83525545 to 83864670 339125 + protein coding gene coiled-coil domain containing 171
Cbx3-ps3 4 83701084 to 83702036 952 + pseudogene chromobox 3, pseudogene 3
Gm26968 4 83743677 to 83744157 480 + sense intronic lncRNA gene predicted gene, 26968
Tssr37696 4 83773638 to 83773642 4 + TSS region transcription start site region 37696
Gm42309 4 83826128 to 83842051 15923 - lncRNA gene predicted gene, 42309
Habiir3 4 83838893 to 94405503 10566610 QTL hyperoxic acute lung injury imprinted region 3
Tlsr4 4 83838893 to 83839021 128 QTL thymic lymphoma suppressor region 4
D4Mit116 4 83838893 to 83839021 128 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 116
Gm11415 4 83884738 to 83888858 4120 - lincRNA gene predicted gene 11415
D4Mit143 4 83970208 to 83970351 143 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 143
Mbsyd 4 83970208 to 83970351 143 QTL metabolic syndrome
D4Mit328 4 84000697 to 84000820 123 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 328
6030471H07Rik 4 84042040 to 84044879 2839 - lincRNA gene RIKEN cDNA 6030471H07 gene
Gm33480 4 84072395 to 84081923 9528 - lncRNA gene predicted gene, 33480
Gm33410 4 84072618 to 84101430 28812 + lncRNA gene predicted gene, 33410
Tssr37697 4 84104825 to 84104829 4 + TSS region transcription start site region 37697
Gm12416 4 84104895 to 84105902 1007 + pseudogene predicted gene 12416
Gm42310 4 84110347 to 84113352 3005 + lncRNA gene predicted gene, 42310
Gm12414 4 84126350 to 84130289 3939 - lincRNA gene predicted gene 12414
Gm33597 4 84133256 to 84220733 87477 - lncRNA gene predicted gene, 33597
Bnc2 4 84275095 to 84675275 400180 - protein coding gene basonuclin 2
Tssr42308 4 84357042 to 84357045 3 - TSS region transcription start site region 42308
Tssr42309 4 84383928 to 84383932 4 - TSS region transcription start site region 42309
Gm12421 4 84428818 to 84429124 306 - pseudogene predicted gene 12421
Tssr37698 4 84429454 to 84429472 18 + TSS region transcription start site region 37698
Tssr42310 4 84456182 to 84456199 17 - TSS region transcription start site region 42310
Tssr42311 4 84518564 to 84518569 5 - TSS region transcription start site region 42311
Tssr42312 4 84532255 to 84532256 1 - TSS region transcription start site region 42312
Cpgi14409 4 84545201 to 84546035 834 CpG island CpG island 14409
Tssr42313 4 84546284 to 84546300 16 - TSS region transcription start site region 42313
Tssr42314 4 84546456 to 84546472 16 - TSS region transcription start site region 42314
Tssr42315 4 84548393 to 84548403 10 - TSS region transcription start site region 42315