Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:8308747-8798751

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44 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
D4Mit235 4 8328955 to 8329070 115 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 235
D4Mit235.1 4 8329044 to 8329159 115 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 235.1
Gm42252 4 8374934 to 8419717 44783 - lncRNA gene predicted gene, 42252
D4Mit104 4 8426721 to 8426963 242 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 104
Whl 4 8426721 to 9574055 1147334 heritable phenotypic marker wheels
D4Mit104.1 4 8426747 to 8426860 113 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 104.1
Gm37386 4 8438522 to 8454247 15725 - unclassified gene predicted gene, 37386
Gm11810 4 8456166 to 8456498 332 - pseudogene predicted gene 11810
Tssr40886 4 8456557 to 8456558 1 - TSS region transcription start site region 40886
Tssr36409 4 8461427 to 8461461 34 + TSS region transcription start site region 36409
Gm18098 4 8461492 to 8467480 5988 + pseudogene predicted gene, 18098
Cpgi14005 4 8535445 to 8536494 1049 CpG island CpG island 14005
Rab2a 4 8535587 to 8607702 72115 + protein coding gene RAB2A, member RAS oncogene family
Tssr36410 4 8535604 to 8535717 113 + TSS region transcription start site region 36410
Tssr36411 4 8535729 to 8535738 9 + TSS region transcription start site region 36411
Tssr36412 4 8535818 to 8535851 33 + TSS region transcription start site region 36412
Tssr36413 4 8553747 to 8553751 4 + TSS region transcription start site region 36413
D130047N11Rik 4 8582775 to 8586326 3551 unclassified gene RIKEN cDNA D130047N11 gene
C530036F05Rik 4 8596992 to 8599711 2719 unclassified gene RIKEN cDNA C530036F05 gene
Tssr1114 4 8625733 to 8625735 2 + TSS region transcription start site region 1114
Gm42253 4 8635181 to 8646297 11116 - lncRNA gene predicted gene, 42253
Tssr40887 4 8642812 to 8642816 4 - TSS region transcription start site region 40887
Cpgi14006 4 8646904 to 8647795 891 CpG island CpG island 14006
Gm8273 4 8646963 to 8649081 2118 - unclassified gene predicted gene 8273
Cpgi14007 4 8648083 to 8648583 500 CpG island CpG island 14007
Tssr40888 4 8648438 to 8648459 21 - TSS region transcription start site region 40888
Gm11809 4 8672636 to 8673582 946 - pseudogene predicted gene 11809
Tssr40889 4 8673720 to 8673729 9 - TSS region transcription start site region 40889
Cpgi14008 4 8689636 to 8692377 2741 CpG island CpG island 14008
Tssr36414 4 8690399 to 8690453 54 + TSS region transcription start site region 36414
Chd7 4 8690406 to 8867659 177253 + protein coding gene chromodomain helicase DNA binding protein 7
Tssr36415 4 8690537 to 8690583 46 + TSS region transcription start site region 36415
Tssr36416 4 8691303 to 8691380 77 + TSS region transcription start site region 36416
Tssr36417 4 8711764 to 8711767 3 + TSS region transcription start site region 36417
Gm46841 4 8720972 to 8731950 10978 + protein coding gene predicted gene, 46841
Tssr36418 4 8731997 to 8732000 3 + TSS region transcription start site region 36418
Tssr36419 4 8735931 to 8735942 11 + TSS region transcription start site region 36419
Tssr36420 4 8735946 to 8735963 17 + TSS region transcription start site region 36420
Tssr36421 4 8735969 to 8736085 116 + TSS region transcription start site region 36421
Tssr1115 4 8736088 to 8736099 11 + TSS region transcription start site region 1115
Cpgi14009 4 8751730 to 8752288 558 CpG island CpG island 14009
Tssr36422 4 8752330 to 8752351 21 + TSS region transcription start site region 36422
Tssr36423 4 8785543 to 8785550 7 + TSS region transcription start site region 36423
Tssr36424 4 8785651 to 8785688 37 + TSS region transcription start site region 36424