MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 4:83001541-83241741

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Mmtg1	4	45658442 to 83180920	37522478		QTL	modifier of mammary tumor growth 1
Frem1	4	82897920 to 83052339	154419	-	protein coding gene	Fras1 related extracellular matrix protein 1
Tssr42278	4	83003061 to 83003065	4	-	TSS region	transcription start site region 42278
Tssr42279	4	83021129 to 83021135	6	-	TSS region	transcription start site region 42279
Tssr37688	4	83023797 to 83023802	5	+	TSS region	transcription start site region 37688
4930441N18Rik	4	83023798 to 83024239	441		unclassified gene	RIKEN cDNA 4930441N18 gene
Tssr42280	4	83052147 to 83052185	38	-	TSS region	transcription start site region 42280
Tssr42281	4	83052186 to 83052197	11	-	TSS region	transcription start site region 42281
Tssr42282	4	83052229 to 83052241	12	-	TSS region	transcription start site region 42282
Gm24884	4	83078511 to 83078629	118	+	snoRNA gene	predicted gene, 24884
Tssr37689	4	83121518 to 83121525	7	+	TSS region	transcription start site region 37689
Gm11248	4	83121541 to 83121741	200	+	pseudogene	predicted gene 11248
Gm46887	4	83178401 to 83186545	8144	-	lncRNA gene	predicted gene, 46887
D4Mit348	4	83180747 to 83180920	173		DNA segment	DNA Segment, Chr 4, Massachusetts Institute of Technology 348
Gm11185	4	83193988 to 83194994	1006	+	pseudogene	predicted gene 11185
Tssr42283	4	83203776 to 83203777	1	-	TSS region	transcription start site region 42283
Ttc39b	4	83220300 to 83324255	103955	-	protein coding gene	tetratricopeptide repeat domain 39B
Tssr42284	4	83233165 to 83233177	12	-	TSS region	transcription start site region 42284