Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:82401220-82781223

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52 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Nfib 4 82290173 to 82505779 215606 - protein coding gene nuclear factor I/B
Tssr42239 4 82422530 to 82422534 4 - TSS region transcription start site region 42239
n-R5s188 4 82439410 to 82439514 104 + rRNA gene nuclear encoded rRNA 5S 188
2310067E19Rik 4 82450058 to 82458093 8035 - unclassified gene RIKEN cDNA 2310067E19 gene
Tssr42240 4 82475066 to 82475070 4 - TSS region transcription start site region 42240
Tssr42241 4 82492817 to 82492851 34 - TSS region transcription start site region 42241
Tssr42242 4 82498389 to 82498401 12 - TSS region transcription start site region 42242
Tssr42243 4 82498422 to 82498433 11 - TSS region transcription start site region 42243
Tssr42244 4 82498518 to 82498535 17 - TSS region transcription start site region 42244
Tssr42245 4 82499292 to 82499325 33 - TSS region transcription start site region 42245
Tssr42246 4 82499328 to 82499355 27 - TSS region transcription start site region 42246
Cpgi14398 4 82504127 to 82507379 3252 CpG island CpG island 14398
Tssr42247 4 82504895 to 82504898 3 - TSS region transcription start site region 42247
Tssr42248 4 82505222 to 82505229 7 - TSS region transcription start site region 42248
Tssr42249 4 82505244 to 82505255 11 - TSS region transcription start site region 42249
Tssr42250 4 82505274 to 82505358 84 - TSS region transcription start site region 42250
Tssr42251 4 82505370 to 82505386 16 - TSS region transcription start site region 42251
Tssr42252 4 82505596 to 82505601 5 - TSS region transcription start site region 42252
Tssr42253 4 82505679 to 82505690 11 - TSS region transcription start site region 42253
Tssr42254 4 82505718 to 82505739 21 - TSS region transcription start site region 42254
Tssr42255 4 82505749 to 82505802 53 - TSS region transcription start site region 42255
Tssr42256 4 82505803 to 82505806 3 - TSS region transcription start site region 42256
Tssr42257 4 82505833 to 82505838 5 - TSS region transcription start site region 42257
Tssr42258 4 82505858 to 82505867 9 - TSS region transcription start site region 42258
Tssr37680 4 82505923 to 82505954 31 + TSS region transcription start site region 37680
Tssr42259 4 82506432 to 82506474 42 - TSS region transcription start site region 42259
Tssr37681 4 82507946 to 82508000 54 + TSS region transcription start site region 37681
Tssr37682 4 82508006 to 82508019 13 + TSS region transcription start site region 37682
Tssr37683 4 82509584 to 82509592 8 + TSS region transcription start site region 37683
Cpgi14399 4 82512712 to 82513633 921 CpG island CpG island 14399
Tssr37684 4 82513366 to 82513408 42 + TSS region transcription start site region 37684
Cpgi14400 4 82536561 to 82537169 608 CpG island CpG island 14400
Cpgi14401 4 82537439 to 82537626 187 CpG island CpG island 14401
Tssr37685 4 82537643 to 82537649 6 + TSS region transcription start site region 37685
Gm11266 4 82540511 to 82547295 6784 + antisense lncRNA gene predicted gene 11266
Tssr42260 4 82561690 to 82561692 2 - TSS region transcription start site region 42260
Gm11267 4 82585048 to 82587319 2271 - sense intronic lncRNA gene predicted gene 11267
Tssr1214 4 82591220 to 82591223 3 + TSS region transcription start site region 1214
Gm42305 4 82605505 to 82606917 1412 + lncRNA gene predicted gene, 42305
n-THgtg10 4 82619623 to 82619694 71 - tRNA gene nuclear encoded tRNA histidine 10 (anticodon GTG)
D4Mit299 4 82638138 to 82638224 86 DNA segment DNA Segment, Chr 4, Massachusetts Institute of Technology 299
Gm11268 4 82642400 to 82642666 266 + pseudogene predicted gene 11268
Tssr42261 4 82687821 to 82687822 1 - TSS region transcription start site region 42261
Tssr37686 4 82692751 to 82692767 16 + TSS region transcription start site region 37686
Tssr37687 4 82692768 to 82692776 8 + TSS region transcription start site region 37687
Gm11269 4 82692805 to 82693711 906 + antisense lncRNA gene predicted gene 11269
Tssr42262 4 82705623 to 82705637 14 - TSS region transcription start site region 42262
Tssr42263 4 82705640 to 82705659 19 - TSS region transcription start site region 42263
Tssr42264 4 82705662 to 82705703 41 - TSS region transcription start site region 42264
Tssr42265 4 82705735 to 82705754 19 - TSS region transcription start site region 42265
Tssr42266 4 82705900 to 82705909 9 - TSS region transcription start site region 42266
Cpgi14402 4 82734791 to 82734982 191 CpG island CpG island 14402