MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 4:80964223-81644223

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19 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Alcw2	4	75941237 to 81442815	5501578		QTL	alcohol withdrawal 2
Gm27452	4	80967444 to 80967539	95	+	miRNA gene	predicted gene, 27452
Cpgi14396	4	81178730 to 81179014	284		CpG island	CpG island 14396
Mpdz	4	81278500 to 81442815	164315	-	protein coding gene	multiple PDZ domain protein
Tsti1	4	81278500 to 81442815	164315		QTL	tail suspension test immobility 1
Berr8	4	81304223 to 81304223	0		QTL	berghei resistance locus 8
Gm25803	4	81338274 to 81338404	130	-	snoRNA gene	predicted gene, 25803
Tssr42214	4	81348722 to 81348736	14	-	TSS region	transcription start site region 42214
Tssr42215	4	81361463 to 81361500	37	-	TSS region	transcription start site region 42215
D4Mit173	4	81388780 to 81388878	98		DNA segment	DNA segment, Chr 4, Massachusetts Institute of Technology 173
D4Nds7	4	81388789 to 81388879	90		DNA segment	DNA segment, Chr 4, Nuffield Department of Surgery 7
Cpgi14397	4	81442070 to 81443355	1285		CpG island	CpG island 14397
Tssr37673	4	81442426 to 81442444	18	+	TSS region	transcription start site region 37673
Tssr42216	4	81442743 to 81442754	11	-	TSS region	transcription start site region 42216
Tssr42217	4	81442756 to 81442836	80	-	TSS region	transcription start site region 42217
Tssr1211	4	81452333 to 81452341	8	-	TSS region	transcription start site region 1211
Gm11765	4	81455943 to 81461732	5789	-	pseudogene	predicted gene 11765
Tssr42218	4	81572238 to 81572251	13	-	TSS region	transcription start site region 42218
Tssr37674	4	81628270 to 81628275	5	+	TSS region	transcription start site region 37674