Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:80135299-81349128

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31 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ps 4 43631935 to 80851736 37219801 heritable phenotypic marker polysyndactyly
Ccmp4 4 67182025 to 80851736 13669711 QTL cerebellar cAMP 4
Gm11406 4 80440398 to 80440881 483 + pseudogene predicted gene 11406
Gm32658 4 80509338 to 80630259 120921 - lncRNA gene predicted gene, 32658
D4Mit347 4 80671333 to 80671443 110 DNA segment DNA Segment, Chr 4, Massachusetts Institute of Technology 347
Pfat1 4 80701289 to 80701448 159 QTL predicted fat percentage 1
D4Mit81 4 80701289 to 80701448 159 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 81
Gm46885 4 80703650 to 80726133 22483 + lncRNA gene predicted gene, 46885
Gm42304 4 80740299 to 80744128 3829 + lncRNA gene predicted gene, 42304
Tssr37665 4 80834204 to 80834221 17 + TSS region transcription start site region 37665
Lyr 4 80834208 to 88850951 8016743 QTL lymphoma resistance
Tyrp1 4 80834208 to 80851736 17528 + protein coding gene tyrosinase-related protein 1
Tssr37666 4 80834286 to 80834295 9 + TSS region transcription start site region 37666
Tssr37667 4 80834298 to 80834313 15 + TSS region transcription start site region 37667
Tssr37668 4 80834330 to 80834355 25 + TSS region transcription start site region 37668
Tssr37669 4 80834363 to 80834376 13 + TSS region transcription start site region 37669
D4Mit174 4 80842723 to 80842854 131 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 174
Tssr37670 4 80910670 to 80910685 15 + TSS region transcription start site region 37670
Lurap1l 4 80910686 to 80954301 43615 + protein coding gene leucine rich adaptor protein 1-like
Tssr37671 4 80910844 to 80910859 15 + TSS region transcription start site region 37671
Cpgi14395 4 80910948 to 80912030 1082 CpG island CpG island 14395
2010003D24Rik 4 80914348 to 80914809 461 unclassified gene RIKEN cDNA 2010003D24 gene
9430051O21Rik 4 80917389 to 80918761 1372 unclassified gene RIKEN cDNA 9430051O21 gene
Tssr37672 4 80932141 to 80932145 4 + TSS region transcription start site region 37672
Gm27452 4 80967444 to 80967539 95 + miRNA gene predicted gene, 27452
Cpgi14396 4 81178730 to 81179014 284 CpG island CpG island 14396
Tsti1 4 81278500 to 81442815 164315 QTL tail suspension test immobility 1
Mpdz 4 81278500 to 81442815 164315 - protein coding gene multiple PDZ domain protein
Berr8 4 81304223 to 81304223 0 QTL berghei resistance locus 8
Gm25803 4 81338274 to 81338404 130 - snoRNA gene predicted gene, 25803
Tssr42214 4 81348722 to 81348736 14 - TSS region transcription start site region 42214