MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 4:78210147-79130232

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Ptprd	4	75941237 to 78211895	2270658	-	protein coding gene	protein tyrosine phosphatase, receptor type, D
Cpgi14392	4	78211277 to 78212593	1316		CpG island	CpG island 14392
Tssr42208	4	78211685 to 78211696	11	-	TSS region	transcription start site region 42208
Tssr42209	4	78211732 to 78211754	22	-	TSS region	transcription start site region 42209
Tssr42210	4	78211758 to 78211790	32	-	TSS region	transcription start site region 42210
Tssr42211	4	78211827 to 78211889	62	-	TSS region	transcription start site region 42211
Tssr42212	4	78211949 to 78211999	50	-	TSS region	transcription start site region 42212
B230208B08Rik	4	78211955 to 78214177	2222	+	unclassified non-coding RNA gene	RIKEN cDNA B230208B08 gene
Tssr37650	4	78212014 to 78212049	35	+	TSS region	transcription start site region 37650
Gm11260	4	78234001 to 78234766	765	+	pseudogene	predicted gene 11260
Gm32545	4	78267867 to 78382708	114841	+	lncRNA gene	predicted gene, 32545
A430085M09Rik	4	78594047 to 78597484	3437	+	lncRNA gene	RIKEN cDNA A430085M09 gene
Gm11261	4	78659858 to 78661588	1730	-	lincRNA gene	predicted gene 11261
Gm22262	4	78670147 to 78670232	85	+	unclassified non-coding RNA gene	predicted gene, 22262
Gm11262	4	78697652 to 78698928	1276	+	pseudogene	predicted gene 11262
Tssr37651	4	78773690 to 78773724	34	+	TSS region	transcription start site region 37651
Tssr37652	4	78773814 to 78773846	32	+	TSS region	transcription start site region 37652
Tssr37653	4	78774041 to 78774054	13	+	TSS region	transcription start site region 37653