Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:7392031-8432042

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr40875 4 7442554 to 7442557 3 - TSS region transcription start site region 40875
Tssr40876 4 7455076 to 7455087 11 - TSS region transcription start site region 40876
Tssr40877 4 7455236 to 7455249 13 - TSS region transcription start site region 40877
Tssr40878 4 7455278 to 7455298 20 - TSS region transcription start site region 40878
Tssr36407 4 7455513 to 7455532 19 + TSS region transcription start site region 36407
8430436N08Rik 4 7560688 to 7573801 13113 + lincRNA gene RIKEN cDNA 8430436N08 gene
Gm33752 4 7581585 to 7648909 67324 - lncRNA gene predicted gene, 33752
Tssr36408 4 7669955 to 7669958 3 + TSS region transcription start site region 36408
Tssr40879 4 7687356 to 7687365 9 - TSS region transcription start site region 40879
Gm11795 4 7759670 to 7763930 4260 + lincRNA gene predicted gene 11795
Gm11794 4 7763264 to 7763500 236 - pseudogene predicted gene 11794
Gm23860 4 7820916 to 7821047 131 + snoRNA gene predicted gene, 23860
Tssr40880 4 7898001 to 7898018 17 - TSS region transcription start site region 40880
Tssr40881 4 7912031 to 7912042 11 - TSS region transcription start site region 40881
Tssr40882 4 7912057 to 7912071 14 - TSS region transcription start site region 40882
Gm11800 4 8118620 to 8119736 1116 + pseudogene predicted gene 11800
Tssr40883 4 8142818 to 8142821 3 - TSS region transcription start site region 40883
Car8 4 8143362 to 8239041 95679 - protein coding gene carbonic anhydrase 8
Gm11799 4 8166894 to 8167353 459 - pseudogene predicted gene 11799
Gm25355 4 8235582 to 8235682 100 + miRNA gene predicted gene, 25355
Tssr40884 4 8238091 to 8238102 11 - TSS region transcription start site region 40884
Cpgi14004 4 8238642 to 8239282 640 CpG island CpG island 14004
Tssr40885 4 8239034 to 8239047 13 - TSS region transcription start site region 40885
D4Mit235 4 8328955 to 8329070 115 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 235
D4Mit235.1 4 8329044 to 8329159 115 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 235.1
Gm42252 4 8374934 to 8419717 44783 - lncRNA gene predicted gene, 42252
D4Mit104 4 8426721 to 8426963 242 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 104
Whl 4 8426721 to 9574055 1147334 heritable phenotypic marker wheels
D4Mit104.1 4 8426747 to 8426860 113 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 104.1