Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:69205334-71615360

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63 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm31905 4 69259299 to 69262035 2736 - lncRNA gene predicted gene, 31905
Gm11404 4 69291621 to 69295121 3500 - pseudogene predicted gene 11404
Tssr42102 4 69395443 to 69395489 46 - TSS region transcription start site region 42102
D4Mit324 4 69604504 to 69604585 81 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 324
Tssr37619 4 69691952 to 69691962 10 + TSS region transcription start site region 37619
Gm11221 4 69691978 to 69692574 596 + pseudogene predicted gene 11221
Tssr42103 4 69758447 to 69758454 7 - TSS region transcription start site region 42103
Tssr42104 4 69758475 to 69758481 6 - TSS region transcription start site region 42104
Tssr42105 4 69758503 to 69758524 21 - TSS region transcription start site region 42105
Tssr42106 4 69758528 to 69758549 21 - TSS region transcription start site region 42106
Tssr37620 4 69853929 to 69853941 12 + TSS region transcription start site region 37620
Gm11222 4 69853947 to 69854681 734 + pseudogene predicted gene 11222
Gm11223 4 69925630 to 69926079 449 - pseudogene predicted gene 11223
Tssr37621 4 69925671 to 69925696 25 + TSS region transcription start site region 37621
Tssr1203 4 69925822 to 69925841 19 + TSS region transcription start site region 1203
Tssr42107 4 69925897 to 69925923 26 - TSS region transcription start site region 42107
Tssr42108 4 69926167 to 69926172 5 - TSS region transcription start site region 42108
Gm11224 4 69954169 to 69955276 1107 - pseudogene predicted gene 11224
Gm11225 4 70047157 to 70048202 1045 + pseudogene predicted gene 11225
Cdk5rap2 4 70216855 to 70410435 193580 - protein coding gene CDK5 regulatory subunit associated protein 2
Tssr42109 4 70243662 to 70243691 29 - TSS region transcription start site region 42109
Ywhaq-ps3 4 70248636 to 70249373 737 - pseudogene tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein theta, pseudogene 3
Tssr42110 4 70249440 to 70249446 6 - TSS region transcription start site region 42110
Tssr42111 4 70252150 to 70252164 14 - TSS region transcription start site region 42111
Tssr42112 4 70252168 to 70252179 11 - TSS region transcription start site region 42112
Tssr42113 4 70260336 to 70260337 1 - TSS region transcription start site region 42113
Tssr42114 4 70307305 to 70307316 11 - TSS region transcription start site region 42114
Tssr42115 4 70307349 to 70307358 9 - TSS region transcription start site region 42115
Tssr37622 4 70378117 to 70378127 10 + TSS region transcription start site region 37622
Tssr37623 4 70378142 to 70378159 17 + TSS region transcription start site region 37623
Tssr37624 4 70378175 to 70378216 41 + TSS region transcription start site region 37624
Tssr42116 4 70378175 to 70378194 19 - TSS region transcription start site region 42116
Tssr42117 4 70378207 to 70378214 7 - TSS region transcription start site region 42117
Tssr42118 4 70378219 to 70378262 43 - TSS region transcription start site region 42118
Tssr37625 4 70378219 to 70378228 9 + TSS region transcription start site region 37625
Cpgi14383 4 70410010 to 70410720 710 CpG island CpG island 14383
Tssr42119 4 70410305 to 70410323 18 - TSS region transcription start site region 42119
Tssr42120 4 70410334 to 70410360 26 - TSS region transcription start site region 42120
Tssr42121 4 70410422 to 70410463 41 - TSS region transcription start site region 42121
Gm26320 4 70412618 to 70412923 305 - unclassified non-coding RNA gene predicted gene, 26320
Megf9 4 70431927 to 70534928 103001 - protein coding gene multiple EGF-like-domains 9
Tssr42122 4 70433431 to 70433462 31 - TSS region transcription start site region 42122
Cpgi14384 4 70534153 to 70535677 1524 CpG island CpG island 14384
Tssr42123 4 70534870 to 70534885 15 - TSS region transcription start site region 42123
Tssr42124 4 70534904 to 70534987 83 - TSS region transcription start site region 42124
Gm32209 4 70553680 to 70665012 111332 + lncRNA gene predicted gene, 32209
Tssr37626 4 70553692 to 70553734 42 + TSS region transcription start site region 37626
Tssr37627 4 70582416 to 70582423 7 + TSS region transcription start site region 37627
Tssr37628 4 70625173 to 70625202 29 + TSS region transcription start site region 37628
Tssr37629 4 70625207 to 70625220 13 + TSS region transcription start site region 37629
Tssr1204 4 70625224 to 70625229 5 + TSS region transcription start site region 1204
D4Mit132 4 70672553 to 70672675 122 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 132
D4Dcr7 4 70672554 to 70672659 105 DNA segment DNA Segment, Chr 4, Derry C. Roopenian 7
Gm42297 4 70679233 to 70691711 12478 + lncRNA gene predicted gene, 42297
D4Mit83 4 70962376 to 70962548 172 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 83
Gm11227 4 71072673 to 71073143 470 + pseudogene predicted gene 11227
Gm11228 4 71075109 to 71131133 56024 - lincRNA gene predicted gene 11228
Gm18534 4 71094603 to 71095899 1296 - pseudogene predicted gene, 18534
Gm11229 4 71285942 to 71286378 436 + pseudogene predicted gene 11229
Rps18-ps1 4 71370738 to 71371196 458 - pseudogene ribosomal protein S18, pseudogene 1
Gm42298 4 71381969 to 71397235 15266 + lncRNA gene predicted gene, 42298
Hbasrq1 4 71553352 to 71553352 0 QTL habituation of the acoustic startle response QTL 1
Hbasrq1a 4 71553352 to 71553352 0 QTL habituation of the acoustic startle response QTL 1a