Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:68490443-70300489

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43 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr37618 4 68587905 to 68587912 7 + TSS region transcription start site region 37618
Brinp1 4 68761514 to 68954397 192883 - protein coding gene bone morphogenic protein/retinoic acid inducible neural specific 1
Tssr42094 4 68762068 to 68762087 19 - TSS region transcription start site region 42094
9330154F10Rik 4 68800551 to 68801629 1078 unclassified gene RIKEN cDNA 9330154F10 gene
D4Mit346 4 68802434 to 68802554 120 DNA segment DNA Segment, Chr 4, Massachusetts Institute of Technology 346
Tssr42095 4 68882671 to 68882677 6 - TSS region transcription start site region 42095
Tssr42096 4 68937714 to 68937715 1 - TSS region transcription start site region 42096
Cpgi14382 4 68953639 to 68954878 1239 CpG island CpG island 14382
Tssr42097 4 68954256 to 68954267 11 - TSS region transcription start site region 42097
Tssr42098 4 68954351 to 68954397 46 - TSS region transcription start site region 42098
Tssr42099 4 68954414 to 68954423 9 - TSS region transcription start site region 42099
Tssr42100 4 68954429 to 68954438 9 - TSS region transcription start site region 42100
Tssr42101 4 68954740 to 68954758 18 - TSS region transcription start site region 42101
Gm42296 4 68957912 to 68959666 1754 + lncRNA gene predicted gene, 42296
Gm24697 4 69110671 to 69110777 106 + snRNA gene predicted gene, 24697
Tssr1202 4 69157226 to 69157230 4 - TSS region transcription start site region 1202
Gm46884 4 69167538 to 69199826 32288 - lncRNA gene predicted gene, 46884
Gm31905 4 69259299 to 69262035 2736 - lncRNA gene predicted gene, 31905
Gm11404 4 69291621 to 69295121 3500 - pseudogene predicted gene 11404
Tssr42102 4 69395443 to 69395489 46 - TSS region transcription start site region 42102
D4Mit324 4 69604504 to 69604585 81 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 324
Tssr37619 4 69691952 to 69691962 10 + TSS region transcription start site region 37619
Gm11221 4 69691978 to 69692574 596 + pseudogene predicted gene 11221
Tssr42103 4 69758447 to 69758454 7 - TSS region transcription start site region 42103
Tssr42104 4 69758475 to 69758481 6 - TSS region transcription start site region 42104
Tssr42105 4 69758503 to 69758524 21 - TSS region transcription start site region 42105
Tssr42106 4 69758528 to 69758549 21 - TSS region transcription start site region 42106
Tssr37620 4 69853929 to 69853941 12 + TSS region transcription start site region 37620
Gm11222 4 69853947 to 69854681 734 + pseudogene predicted gene 11222
Gm11223 4 69925630 to 69926079 449 - pseudogene predicted gene 11223
Tssr37621 4 69925671 to 69925696 25 + TSS region transcription start site region 37621
Tssr1203 4 69925822 to 69925841 19 + TSS region transcription start site region 1203
Tssr42107 4 69925897 to 69925923 26 - TSS region transcription start site region 42107
Tssr42108 4 69926167 to 69926172 5 - TSS region transcription start site region 42108
Gm11224 4 69954169 to 69955276 1107 - pseudogene predicted gene 11224
Gm11225 4 70047157 to 70048202 1045 + pseudogene predicted gene 11225
Cdk5rap2 4 70216855 to 70410435 193580 - protein coding gene CDK5 regulatory subunit associated protein 2
Tssr42109 4 70243662 to 70243691 29 - TSS region transcription start site region 42109
Ywhaq-ps3 4 70248636 to 70249373 737 - pseudogene tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein theta, pseudogene 3
Tssr42110 4 70249440 to 70249446 6 - TSS region transcription start site region 42110
Tssr42111 4 70252150 to 70252164 14 - TSS region transcription start site region 42111
Tssr42112 4 70252168 to 70252179 11 - TSS region transcription start site region 42112
Tssr42113 4 70260336 to 70260337 1 - TSS region transcription start site region 42113