Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:64945803-66839531

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48 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Lfibq13 4 63685589 to 65386538 1700949 QTL liver fibrosis QTL 13
Gm11219 4 65011230 to 65011587 357 + pseudogene predicted gene 11219
Tssr37597 4 65123748 to 65123768 20 + TSS region transcription start site region 37597
Pappa 4 65124174 to 65357509 233335 + protein coding gene pregnancy-associated plasma protein A
Cpgi14376 4 65124434 to 65125266 832 CpG island CpG island 14376
Tssr37598 4 65156464 to 65156497 33 + TSS region transcription start site region 37598
B.seq 4 65195206 to 65195375 169 DNA segment DNA segment, B
D4Mcg10 4 65285559 to 65285691 132 DNA segment DNA segment, Chr 4, McGill University 10
Tssr37599 4 65339482 to 65339487 5 + TSS region transcription start site region 37599
D4Nds9 4 65341379 to 65341468 89 DNA segment DNA segment, Chr 4, Nuffield Department of Surgery 9
Astn2 4 65380803 to 66404531 1023728 - protein coding gene astrotactin 2
Tssr42087 4 65381346 to 65381358 12 - TSS region transcription start site region 42087
Cpgi14377 4 65381398 to 65381593 195 CpG island CpG island 14377
Mh 4 65386538 to 65386538 0 QTL modifier of hemostasis
Tssr37600 4 65407976 to 65407985 9 + TSS region transcription start site region 37600
Tssr1199 4 65408015 to 65408024 9 + TSS region transcription start site region 1199
D4Mit25 4 65548396 to 65548603 207 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 25
Cpgi14378 4 65604823 to 65605341 518 CpG island CpG island 14378
Tssr37601 4 65604984 to 65605052 68 + TSS region transcription start site region 37601
Trim32 4 65604986 to 65616238 11252 + protein coding gene tripartite motif-containing 32
Tssr37602 4 65605054 to 65605061 7 + TSS region transcription start site region 37602
Cpgi14379 4 65613402 to 65613674 272 CpG island CpG island 14379
Tssr1200 4 65615091 to 65615103 12 + TSS region transcription start site region 1200
Tssr37603 4 65617672 to 65617681 9 + TSS region transcription start site region 37603
3632413A11Rik 4 65623202 to 65626063 2861 unclassified gene RIKEN cDNA 3632413A11 gene
Gm31533 4 65628952 to 65634800 5848 + lncRNA gene predicted gene, 31533
Tssr42088 4 66159778 to 66159786 8 - TSS region transcription start site region 42088
Tssr42089 4 66346157 to 66346160 3 - TSS region transcription start site region 42089
Gm11484 4 66353849 to 66354186 337 + pseudogene predicted gene 11484
Cpgi14380 4 66402673 to 66403173 500 CpG island CpG island 14380
Cpgi14381 4 66403426 to 66404994 1568 CpG island CpG island 14381
Tssr42090 4 66404434 to 66404456 22 - TSS region transcription start site region 42090
Tssr42091 4 66404458 to 66404509 51 - TSS region transcription start site region 42091
Tssr42092 4 66404512 to 66404527 15 - TSS region transcription start site region 42092
D4Mcg6 4 66430883 to 66431000 117 DNA segment DNA segment, Chr 4, McGill University 6
D4Mcg27 4 66517187 to 66517326 139 DNA segment DNA segment, Chr 4, McGill University 27
Gm25480 4 66544061 to 66544193 132 + snoRNA gene predicted gene, 25480
D4Mcg24 4 66561307 to 66561419 112 DNA segment DNA segment, Chr 4, McGill University 24
D4Mcg25 4 66652069 to 66652234 165 DNA segment DNA segment, Chr 4, McGill University 25
Gm11220 4 66725070 to 66725544 474 - pseudogene predicted gene 11220
Tssr37604 4 66827545 to 66827617 72 + TSS region transcription start site region 37604
Tlr4 4 66827551 to 66846581 19030 + protein coding gene toll-like receptor 4
Yprl2 4 66827551 to 66846581 19030 QTL Yersinia pestis resistance locus 2
Tssr37605 4 66827637 to 66827644 7 + TSS region transcription start site region 37605
Tssr37606 4 66827678 to 66827697 19 + TSS region transcription start site region 37606
Tssr37607 4 66827699 to 66827723 24 + TSS region transcription start site region 37607
Tssr37608 4 66827735 to 66827766 31 + TSS region transcription start site region 37608
Tssr37609 4 66827772 to 66827793 21 + TSS region transcription start site region 37609