Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:63734935-64224946

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39 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm42295 4 63696384 to 63744868 48484 + lncRNA gene predicted gene, 42295
Tnfsf15 4 63727084 to 63745113 18029 - protein coding gene tumor necrosis factor (ligand) superfamily, member 15
Tssr42070 4 63743750 to 63743768 18 - TSS region transcription start site region 42070
Tssr42071 4 63744013 to 63744041 28 - TSS region transcription start site region 42071
Gm42294 4 63745032 to 63773177 28145 + lncRNA gene predicted gene, 42294
Tssr42072 4 63745055 to 63745061 6 - TSS region transcription start site region 42072
Tssr42073 4 63745107 to 63745118 11 - TSS region transcription start site region 42073
Tssr42074 4 63745190 to 63745205 15 - TSS region transcription start site region 42074
Tnfsf8 4 63832820 to 63861508 28688 - protein coding gene tumor necrosis factor (ligand) superfamily, member 8
Tssr42075 4 63860892 to 63860921 29 - TSS region transcription start site region 42075
Tssr42076 4 63860923 to 63860946 23 - TSS region transcription start site region 42076
Tssr42077 4 63861029 to 63861046 17 - TSS region transcription start site region 42077
Tssr42078 4 63861100 to 63861122 22 - TSS region transcription start site region 42078
Tssr42079 4 63861278 to 63861293 15 - TSS region transcription start site region 42079
Tssr42080 4 63861296 to 63861318 22 - TSS region transcription start site region 42080
Tssr42081 4 63861326 to 63861355 29 - TSS region transcription start site region 42081
Rpl17-ps4 4 63895545 to 63896099 554 - pseudogene ribosomal protein L17, pseudogene 4
Tssr37586 4 63935640 to 63935652 12 + TSS region transcription start site region 37586
Tnc 4 63959785 to 64047015 87230 - protein coding gene tenascin C
Tssr1198 4 63979851 to 63979856 5 + TSS region transcription start site region 1198
Tssr37587 4 63979861 to 63979870 9 + TSS region transcription start site region 37587
Tssr37588 4 63979880 to 63979883 3 + TSS region transcription start site region 37588
Tssr37589 4 63979891 to 63979904 13 + TSS region transcription start site region 37589
Tssr37590 4 63979909 to 63979916 7 + TSS region transcription start site region 37590
Tssr37591 4 63979935 to 63979946 11 + TSS region transcription start site region 37591
Tssr37592 4 63979957 to 63979966 9 + TSS region transcription start site region 37592
Tssr37593 4 63982640 to 63982651 11 + TSS region transcription start site region 37593
Tssr42082 4 63987826 to 63987835 9 - TSS region transcription start site region 42082
Tssr42083 4 63997055 to 63997071 16 - TSS region transcription start site region 42083
Tssr42084 4 63997129 to 63997143 14 - TSS region transcription start site region 42084
Tssr37594 4 63998334 to 63998337 3 + TSS region transcription start site region 37594
8030451A03Rik 4 64012064 to 64148556 136492 + unclassified non-coding RNA gene RIKEN cDNA 8030451A03 gene
Cpgi14374 4 64017138 to 64018056 918 CpG island CpG island 14374
Tssr37595 4 64020178 to 64020194 16 + TSS region transcription start site region 37595
Cpgi14375 4 64046761 to 64047131 370 CpG island CpG island 14375
Tssr42085 4 64046925 to 64046944 19 - TSS region transcription start site region 42085
Gm11216 4 64075533 to 64083814 8281 + lincRNA gene predicted gene 11216
Gm31115 4 64154280 to 64286118 131838 + lncRNA gene predicted gene, 31115
Tssr37596 4 64154361 to 64154405 44 + TSS region transcription start site region 37596