Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:63396035-63596065

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51 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Akna 4 63367125 to 63403354 36229 - protein coding gene AT-hook transcription factor
Tssr37558 4 63399519 to 63399522 3 + TSS region transcription start site region 37558
Tssr42040 4 63401670 to 63401701 31 - TSS region transcription start site region 42040
Tssr42041 4 63403245 to 63403259 14 - TSS region transcription start site region 42041
Tssr42042 4 63403269 to 63403274 5 - TSS region transcription start site region 42042
Tssr42043 4 63403277 to 63403286 9 - TSS region transcription start site region 42043
Tssr42044 4 63403330 to 63403350 20 - TSS region transcription start site region 42044
Tssr42045 4 63403361 to 63403376 15 - TSS region transcription start site region 42045
Tssr37559 4 63409605 to 63409627 22 + TSS region transcription start site region 37559
Cpgi14370 4 63409873 to 63410876 1003 CpG island CpG island 14370
Tssr42046 4 63409993 to 63410004 11 - TSS region transcription start site region 42046
Tssr42047 4 63410010 to 63410024 14 - TSS region transcription start site region 42047
Tssr42048 4 63410188 to 63410212 24 - TSS region transcription start site region 42048
Tssr42049 4 63410214 to 63410231 17 - TSS region transcription start site region 42049
Tssr42050 4 63410683 to 63410702 19 - TSS region transcription start site region 42050
Tssr42051 4 63410705 to 63410726 21 - TSS region transcription start site region 42051
Tssr42052 4 63410745 to 63410757 12 - TSS region transcription start site region 42052
Whrn 4 63414910 to 63495991 81081 - protein coding gene whirlin
Tssr42053 4 63418701 to 63418711 10 - TSS region transcription start site region 42053
Tssr42054 4 63452689 to 63452690 1 - TSS region transcription start site region 42054
Tssr42055 4 63467457 to 63467469 12 - TSS region transcription start site region 42055
Cpgi14371 4 63494538 to 63496346 1808 CpG island CpG island 14371
Tssr42056 4 63495982 to 63496033 51 - TSS region transcription start site region 42056
Tssr42057 4 63496035 to 63496065 30 - TSS region transcription start site region 42057
D4Mit244 4 63499084 to 63499193 109 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 244
Cpgi14372 4 63544624 to 63545375 751 CpG island CpG island 14372
Tssr37560 4 63544747 to 63544762 15 + TSS region transcription start site region 37560
Atp6v1g1 4 63544765 to 63550701 5936 + protein coding gene ATPase, H+ transporting, lysosomal V1 subunit G1
Tssr37561 4 63544799 to 63544853 54 + TSS region transcription start site region 37561
Tssr37562 4 63544870 to 63544881 11 + TSS region transcription start site region 37562
Gm38592 4 63545293 to 63547859 2566 + lncRNA gene predicted gene, 38592
Tssr37563 4 63545395 to 63545398 3 + TSS region transcription start site region 37563
Tssr37564 4 63547863 to 63547867 4 + TSS region transcription start site region 37564
Tssr37565 4 63554190 to 63554197 7 + TSS region transcription start site region 37565
Tssr37566 4 63554603 to 63554609 6 + TSS region transcription start site region 37566
Cpgi14373 4 63558366 to 63559466 1100 CpG island CpG island 14373
Tssr37567 4 63558458 to 63558503 45 + TSS region transcription start site region 37567
Tssr42058 4 63558730 to 63558742 12 - TSS region transcription start site region 42058
Tssr37568 4 63558748 to 63558859 111 + TSS region transcription start site region 37568
Tmem268 4 63558781 to 63586357 27576 + protein coding gene transmembrane protein 268
Tssr37569 4 63558879 to 63558932 53 + TSS region transcription start site region 37569
Tssr37570 4 63560188 to 63560199 11 + TSS region transcription start site region 37570
Tssr37571 4 63560217 to 63560236 19 + TSS region transcription start site region 37571
Tssr37572 4 63560241 to 63560266 25 + TSS region transcription start site region 37572
Tssr37573 4 63560627 to 63560649 22 + TSS region transcription start site region 37573
Tssr37574 4 63560653 to 63560660 7 + TSS region transcription start site region 37574
Tssr37575 4 63560703 to 63560710 7 + TSS region transcription start site region 37575
Tssr37576 4 63560716 to 63560740 24 + TSS region transcription start site region 37576
Gm11483 4 63567414 to 63567660 246 - pseudogene predicted gene 11483
Gm24448 4 63567662 to 63567768 106 - snRNA gene predicted gene, 24448
Tssr37577 4 63580560 to 63580568 8 + TSS region transcription start site region 37577