Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:62344684-62524696

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58 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Fkbp15 4 62300342 to 62360548 60206 - protein coding gene FK506 binding protein 15
Tssr41992 4 62348126 to 62348130 4 - TSS region transcription start site region 41992
Tssr41993 4 62359129 to 62359133 4 - TSS region transcription start site region 41993
Cpgi14355 4 62360066 to 62361101 1035 CpG island CpG island 14355
Tssr37483 4 62360185 to 62360227 42 + TSS region transcription start site region 37483
Tssr41994 4 62360329 to 62360334 5 - TSS region transcription start site region 41994
Tssr41995 4 62360419 to 62360433 14 - TSS region transcription start site region 41995
Tssr41996 4 62360436 to 62360511 75 - TSS region transcription start site region 41996
Tssr41997 4 62360524 to 62360552 28 - TSS region transcription start site region 41997
Tssr41998 4 62360556 to 62360576 20 - TSS region transcription start site region 41998
Tssr37484 4 62360695 to 62360758 63 + TSS region transcription start site region 37484
Slc31a1 4 62360727 to 62391769 31042 + protein coding gene solute carrier family 31, member 1
Tssr37485 4 62361582 to 62361587 5 + TSS region transcription start site region 37485
Tssr37486 4 62380015 to 62380017 2 + TSS region transcription start site region 37486
Tssr37487 4 62388594 to 62388624 30 + TSS region transcription start site region 37487
Tssr37488 4 62388723 to 62388744 21 + TSS region transcription start site region 37488
Cdc26 4 62393805 to 62408641 14836 - protein coding gene cell division cycle 26
Cpgi14356 4 62407826 to 62408061 235 CpG island CpG island 14356
Tssr37489 4 62407837 to 62407856 19 + TSS region transcription start site region 37489
Cpgi14357 4 62408322 to 62409182 860 CpG island CpG island 14357
Tssr41999 4 62408618 to 62408643 25 - TSS region transcription start site region 41999
Tssr42000 4 62408647 to 62408658 11 - TSS region transcription start site region 42000
Tssr37490 4 62408770 to 62408865 95 + TSS region transcription start site region 37490
Prpf4 4 62408797 to 62426990 18193 + protein coding gene pre-mRNA processing factor 4
Tssr37491 4 62409844 to 62409847 3 + TSS region transcription start site region 37491
Rnf183 4 62427536 to 62434726 7190 - protein coding gene ring finger protein 183
Cpgi14358 4 62428071 to 62428247 176 CpG island CpG island 14358
Gm30589 4 62434605 to 62443851 9246 + lncRNA gene predicted gene, 30589
Tssr42001 4 62434633 to 62434644 11 - TSS region transcription start site region 42001
Tssr42002 4 62434684 to 62434696 12 - TSS region transcription start site region 42002
Tssr42003 4 62434722 to 62434738 16 - TSS region transcription start site region 42003
Wdr31 4 62448653 to 62470896 22243 - protein coding gene WD repeat domain 31
Tssr42004 4 62468880 to 62468903 23 - TSS region transcription start site region 42004
Tssr42005 4 62468907 to 62468923 16 - TSS region transcription start site region 42005
Cpgi14359 4 62470629 to 62471166 537 CpG island CpG island 14359
Tssr42006 4 62470868 to 62470922 54 - TSS region transcription start site region 42006
Tssr42007 4 62470924 to 62470932 8 - TSS region transcription start site region 42007
Cpgi14360 4 62479911 to 62480700 789 CpG island CpG island 14360
Tssr37492 4 62480025 to 62480098 73 + TSS region transcription start site region 37492
Bspry 4 62480053 to 62497298 17245 + protein coding gene B-box and SPRY domain containing
Hdhd3 4 62499054 to 62502200 3146 - protein coding gene haloacid dehalogenase-like hydrolase domain containing 3
Cpgi14361 4 62501916 to 62502510 594 CpG island CpG island 14361
Tssr42008 4 62502176 to 62502182 6 - TSS region transcription start site region 42008
Tssr42009 4 62502200 to 62502226 26 - TSS region transcription start site region 42009
Tssr42010 4 62502233 to 62502260 27 - TSS region transcription start site region 42010
Cms1 4 62509169 to 62519918 10749 QTL resistance to Coccidioides immitis 1
Alad 4 62509169 to 62519918 10749 - protein coding gene aminolevulinate, delta-, dehydratase
Tssr42011 4 62514178 to 62514220 42 - TSS region transcription start site region 42011
Tssr42012 4 62516668 to 62516703 35 - TSS region transcription start site region 42012
Tssr42013 4 62516706 to 62516721 15 - TSS region transcription start site region 42013
Tssr42014 4 62516743 to 62516752 9 - TSS region transcription start site region 42014
Cpgi14362 4 62519543 to 62520273 730 CpG island CpG island 14362
Tssr42015 4 62519885 to 62519967 82 - TSS region transcription start site region 42015
Tssr42016 4 62520021 to 62520035 14 - TSS region transcription start site region 42016
Tssr42017 4 62520054 to 62520079 25 - TSS region transcription start site region 42017
Pole3 4 62523798 to 62525014 1216 - protein coding gene polymerase (DNA directed), epsilon 3 (p17 subunit)
Tssr42018 4 62524396 to 62524412 16 - TSS region transcription start site region 42018
Cpgi14363 4 62524516 to 62525572 1056 CpG island CpG island 14363