Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:62210436-62510511

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79 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr41979 4 62220299 to 62220303 4 - TSS region transcription start site region 41979
Tssr41980 4 62228487 to 62228495 8 - TSS region transcription start site region 41980
Tssr41981 4 62228521 to 62228535 14 - TSS region transcription start site region 41981
Tssr41982 4 62228544 to 62228557 13 - TSS region transcription start site region 41982
Tssr37468 4 62230981 to 62231007 26 + TSS region transcription start site region 37468
Gm23148 4 62264314 to 62264420 106 + snRNA gene predicted gene, 23148
Tssr1191 4 62280378 to 62280379 1 + TSS region transcription start site region 1191
Slc31a2 4 62280393 to 62298412 18019 + protein coding gene solute carrier family 31, member 2
Tssr37469 4 62280399 to 62280421 22 + TSS region transcription start site region 37469
Tssr37470 4 62281606 to 62281640 34 + TSS region transcription start site region 37470
Tssr41983 4 62285698 to 62285705 7 - TSS region transcription start site region 41983
Cpgi14354 4 62286113 to 62286845 732 CpG island CpG island 14354
Tssr37471 4 62286424 to 62286438 14 + TSS region transcription start site region 37471
Tssr37472 4 62286441 to 62286516 75 + TSS region transcription start site region 37472
Tssr37473 4 62294990 to 62295009 19 + TSS region transcription start site region 37473
Tssr37474 4 62295158 to 62295169 11 + TSS region transcription start site region 37474
Tssr37475 4 62297999 to 62298024 25 + TSS region transcription start site region 37475
Tssr37476 4 62298028 to 62298042 14 + TSS region transcription start site region 37476
Tssr37477 4 62298076 to 62298087 11 + TSS region transcription start site region 37477
Tssr37478 4 62298132 to 62298144 12 + TSS region transcription start site region 37478
Tssr37479 4 62298164 to 62298209 45 + TSS region transcription start site region 37479
Tssr37480 4 62298215 to 62298235 20 + TSS region transcription start site region 37480
Tssr41984 4 62298247 to 62298280 33 - TSS region transcription start site region 41984
Fkbp15 4 62300342 to 62360548 60206 - protein coding gene FK506 binding protein 15
Tssr41985 4 62313919 to 62313941 22 - TSS region transcription start site region 41985
Tssr37481 4 62314033 to 62314050 17 + TSS region transcription start site region 37481
Tssr37482 4 62314063 to 62314073 10 + TSS region transcription start site region 37482
Tssr41986 4 62326088 to 62326116 28 - TSS region transcription start site region 41986
Tssr41987 4 62329390 to 62329399 9 - TSS region transcription start site region 41987
Tssr41988 4 62329416 to 62329427 11 - TSS region transcription start site region 41988
Tssr41989 4 62329446 to 62329467 21 - TSS region transcription start site region 41989
Tssr41990 4 62329527 to 62329560 33 - TSS region transcription start site region 41990
Tssr41991 4 62337117 to 62337143 26 - TSS region transcription start site region 41991
Tssr41992 4 62348126 to 62348130 4 - TSS region transcription start site region 41992
Tssr41993 4 62359129 to 62359133 4 - TSS region transcription start site region 41993
Cpgi14355 4 62360066 to 62361101 1035 CpG island CpG island 14355
Tssr37483 4 62360185 to 62360227 42 + TSS region transcription start site region 37483
Tssr41994 4 62360329 to 62360334 5 - TSS region transcription start site region 41994
Tssr41995 4 62360419 to 62360433 14 - TSS region transcription start site region 41995
Tssr41996 4 62360436 to 62360511 75 - TSS region transcription start site region 41996
Tssr41997 4 62360524 to 62360552 28 - TSS region transcription start site region 41997
Tssr41998 4 62360556 to 62360576 20 - TSS region transcription start site region 41998
Tssr37484 4 62360695 to 62360758 63 + TSS region transcription start site region 37484
Slc31a1 4 62360727 to 62391769 31042 + protein coding gene solute carrier family 31, member 1
Tssr37485 4 62361582 to 62361587 5 + TSS region transcription start site region 37485
Tssr37486 4 62380015 to 62380017 2 + TSS region transcription start site region 37486
Tssr37487 4 62388594 to 62388624 30 + TSS region transcription start site region 37487
Tssr37488 4 62388723 to 62388744 21 + TSS region transcription start site region 37488
Cdc26 4 62393805 to 62408641 14836 - protein coding gene cell division cycle 26
Cpgi14356 4 62407826 to 62408061 235 CpG island CpG island 14356
Tssr37489 4 62407837 to 62407856 19 + TSS region transcription start site region 37489
Cpgi14357 4 62408322 to 62409182 860 CpG island CpG island 14357
Tssr41999 4 62408618 to 62408643 25 - TSS region transcription start site region 41999
Tssr42000 4 62408647 to 62408658 11 - TSS region transcription start site region 42000
Tssr37490 4 62408770 to 62408865 95 + TSS region transcription start site region 37490
Prpf4 4 62408797 to 62426990 18193 + protein coding gene pre-mRNA processing factor 4
Tssr37491 4 62409844 to 62409847 3 + TSS region transcription start site region 37491
Rnf183 4 62427536 to 62434726 7190 - protein coding gene ring finger protein 183
Cpgi14358 4 62428071 to 62428247 176 CpG island CpG island 14358
Gm30589 4 62434605 to 62443851 9246 + lncRNA gene predicted gene, 30589
Tssr42001 4 62434633 to 62434644 11 - TSS region transcription start site region 42001
Tssr42002 4 62434684 to 62434696 12 - TSS region transcription start site region 42002
Tssr42003 4 62434722 to 62434738 16 - TSS region transcription start site region 42003
Wdr31 4 62448653 to 62470896 22243 - protein coding gene WD repeat domain 31
Tssr42004 4 62468880 to 62468903 23 - TSS region transcription start site region 42004
Tssr42005 4 62468907 to 62468923 16 - TSS region transcription start site region 42005
Cpgi14359 4 62470629 to 62471166 537 CpG island CpG island 14359
Tssr42006 4 62470868 to 62470922 54 - TSS region transcription start site region 42006
Tssr42007 4 62470924 to 62470932 8 - TSS region transcription start site region 42007
Cpgi14360 4 62479911 to 62480700 789 CpG island CpG island 14360
Tssr37492 4 62480025 to 62480098 73 + TSS region transcription start site region 37492
Bspry 4 62480053 to 62497298 17245 + protein coding gene B-box and SPRY domain containing
Hdhd3 4 62499054 to 62502200 3146 - protein coding gene haloacid dehalogenase-like hydrolase domain containing 3
Cpgi14361 4 62501916 to 62502510 594 CpG island CpG island 14361
Tssr42008 4 62502176 to 62502182 6 - TSS region transcription start site region 42008
Tssr42009 4 62502200 to 62502226 26 - TSS region transcription start site region 42009
Tssr42010 4 62502233 to 62502260 27 - TSS region transcription start site region 42010
Alad 4 62509169 to 62519918 10749 - protein coding gene aminolevulinate, delta-, dehydratase
Cms1 4 62509169 to 62519918 10749 QTL resistance to Coccidioides immitis 1