Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:59618281-59949108

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35 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Hsdl2 4 59581563 to 59618689 37126 + protein coding gene hydroxysteroid dehydrogenase like 2
Tssr37441 4 59618285 to 59618289 4 + TSS region transcription start site region 37441
Cpgi14349 4 59625558 to 59627003 1445 CpG island CpG island 14349
Tssr37442 4 59626189 to 59626253 64 + TSS region transcription start site region 37442
E130308A19Rik 4 59626200 to 59757649 131449 + protein coding gene RIKEN cDNA E130308A19 gene
Tssr37443 4 59633426 to 59633430 4 + TSS region transcription start site region 37443
Tssr37444 4 59674003 to 59674013 10 + TSS region transcription start site region 37444
Tssr37445 4 59728046 to 59728051 5 + TSS region transcription start site region 37445
2700054B07Rik 4 59769123 to 59769390 267 unclassified gene RIKEN cDNA 2700054B07 gene
Inip 4 59769642 to 59783855 14213 - protein coding gene INTS3 and NABP interacting protein
Tssr41949 4 59781371 to 59781375 4 - TSS region transcription start site region 41949
Cpgi14350 4 59783281 to 59784108 827 CpG island CpG island 14350
Tssr41950 4 59783800 to 59783876 76 - TSS region transcription start site region 41950
Tssr37446 4 59805003 to 59805012 9 + TSS region transcription start site region 37446
Cpgi14351 4 59805295 to 59806581 1286 CpG island CpG island 14351
Tssr37447 4 59805829 to 59805914 85 + TSS region transcription start site region 37447
Snx30 4 59805840 to 59904737 98897 + protein coding gene sorting nexin family member 30
Tssr37448 4 59806817 to 59806839 22 + TSS region transcription start site region 37448
D4Mit217 4 59833227 to 59833362 135 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 217
Gm12543 4 59833674 to 59834216 542 + pseudogene predicted gene 12543
Tssr37449 4 59868484 to 59868497 13 + TSS region transcription start site region 37449
Tssr37450 4 59873767 to 59873774 7 + TSS region transcription start site region 37450
Tssr37451 4 59880024 to 59880029 5 + TSS region transcription start site region 37451
Tssr37452 4 59884637 to 59884642 5 + TSS region transcription start site region 37452
Gm12542 4 59889986 to 59894924 4938 - antisense lncRNA gene predicted gene 12542
Tssr1189 4 59890786 to 59890801 15 + TSS region transcription start site region 1189
Tssr37453 4 59905123 to 59905135 12 + TSS region transcription start site region 37453
Slc46a2 4 59905899 to 59915056 9157 - protein coding gene solute carrier family 46, member 2
Tssr41951 4 59914256 to 59914259 3 - TSS region transcription start site region 41951
Cpgi14352 4 59914262 to 59914825 563 CpG island CpG island 14352
Tssr41952 4 59914850 to 59914860 10 - TSS region transcription start site region 41952
Tssr41953 4 59914950 to 59914961 11 - TSS region transcription start site region 41953
Tssr41954 4 59915035 to 59915063 28 - TSS region transcription start site region 41954
Tssr37454 4 59933871 to 59933881 10 + TSS region transcription start site region 37454
Tssr37455 4 59944476 to 59944497 21 + TSS region transcription start site region 37455