MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 4:58930590-59022131

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Gm26400	4	58938025 to 58938109	84	+	rRNA gene	predicted gene, 26400
Cpgi14341	4	58943438 to 58944087	649		CpG island	CpG island 14341
Tssr37403	4	58943575 to 58943638	63	+	TSS region	transcription start site region 37403
Zkscan16	4	58943628 to 58958355	14727	+	protein coding gene	zinc finger with KRAB and SCAN domains 16
Cpgi14342	4	58956819 to 58957211	392		CpG island	CpG island 14342
Ptgr1	4	58965590 to 58987131	21541	-	protein coding gene	prostaglandin reductase 1
Tssr41919	4	58981882 to 58981886	4	-	TSS region	transcription start site region 41919
Tssr37404	4	58985591 to 58985613	22	+	TSS region	transcription start site region 37404
Tssr41920	4	58987068 to 58987086	18	-	TSS region	transcription start site region 41920
Tssr41921	4	58987095 to 58987116	21	-	TSS region	transcription start site region 41921
Tssr41922	4	58987117 to 58987131	14	-	TSS region	transcription start site region 41922
Tssr37405	4	58994309 to 58994321	12	+	TSS region	transcription start site region 37405
Dnajc25	4	58994800 to 59023398	28598	+	protein coding gene	DnaJ heat shock protein family (Hsp40) member C25
4930432F03Rik	4	59002337 to 59003074	737		unclassified gene	RIKEN cDNA 4930432F03 gene
Cpgi14343	4	59002747 to 59003788	1041		CpG island	CpG island 14343
Tssr37406	4	59003121 to 59003215	94	+	TSS region	transcription start site region 37406
Gm20503	4	59003210 to 59041888	38678	+	protein coding gene	predicted gene 20503
Tssr37407	4	59017666 to 59017713	47	+	TSS region	transcription start site region 37407