Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:58289377-58709388

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31 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Musk 4 58285960 to 58374303 88343 + protein coding gene muscle, skeletal, receptor tyrosine kinase
Tssr37400 4 58327268 to 58327279 11 + TSS region transcription start site region 37400
Cpgi14337 4 58366743 to 58366959 216 CpG island CpG island 14337
Cpgi14338 4 58373165 to 58373434 269 CpG island CpG island 14338
Lpar1 4 58435255 to 58553898 118643 - protein coding gene lysophosphatidic acid receptor 1
Tssr41881 4 58436852 to 58436864 12 - TSS region transcription start site region 41881
D4Mit1005 4 58439478 to 58439598 120 DNA segment DNA Segment, Chr 4 Massachusetts Institute of Technology 1005
Mir3095 4 58441012 to 58441098 86 - miRNA gene microRNA 3095
Tssr41882 4 58444116 to 58444120 4 - TSS region transcription start site region 41882
Tssr41883 4 58458932 to 58458939 7 - TSS region transcription start site region 41883
Tssr41884 4 58482098 to 58482110 12 - TSS region transcription start site region 41884
Gm12577 4 58483252 to 58483825 573 - pseudogene predicted gene 12577
Tssr41885 4 58483621 to 58483642 21 - TSS region transcription start site region 41885
Tssr41886 4 58499377 to 58499388 11 - TSS region transcription start site region 41886
Tssr41887 4 58499390 to 58499395 5 - TSS region transcription start site region 41887
Tssr41888 4 58499398 to 58499409 11 - TSS region transcription start site region 41888
Tssr41889 4 58499412 to 58499427 15 - TSS region transcription start site region 41889
Tssr41890 4 58529948 to 58529951 3 - TSS region transcription start site region 41890
Tssr41891 4 58545701 to 58545722 21 - TSS region transcription start site region 41891
Cpgi14339 4 58552841 to 58553951 1110 CpG island CpG island 14339
Tssr41892 4 58553171 to 58553180 9 - TSS region transcription start site region 41892
Tssr41893 4 58553187 to 58553261 74 - TSS region transcription start site region 41893
Tssr41894 4 58553263 to 58553275 12 - TSS region transcription start site region 41894
Tssr41895 4 58553288 to 58553298 10 - TSS region transcription start site region 41895
Tssr41896 4 58553311 to 58553322 11 - TSS region transcription start site region 41896
Tssr41897 4 58553747 to 58553770 23 - TSS region transcription start site region 41897
Gm12578 4 58589764 to 58590180 416 + pseudogene predicted gene 12578
Gm12579 4 58611058 to 58611840 782 + pseudogene predicted gene 12579
Tssr37401 4 58644603 to 58644608 5 + TSS region transcription start site region 37401
Tssr37402 4 58645185 to 58645226 41 + TSS region transcription start site region 37402
Gm12580 4 58648392 to 58658592 10200 - lincRNA gene predicted gene 12580