Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:56095912-56838396

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37 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
vsd 4 39452126 to 56769494 17317368 heritable phenotypic marker ventricular septal defect
Gm12520 4 56162940 to 56163255 315 + pseudogene predicted gene 12520
2310081O03Rik 4 56220617 to 56224521 3904 - lincRNA gene RIKEN cDNA 2310081O03 gene
Tssr41792 4 56224520 to 56224544 24 - TSS region transcription start site region 41792
Gm42291 4 56267323 to 56315967 48644 - lncRNA gene predicted gene, 42291
Gm12518 4 56387802 to 56388574 772 + pseudogene predicted gene 12518
Tssr1176 4 56419755 to 56419794 39 + TSS region transcription start site region 1176
Tssr41793 4 56433057 to 56433064 7 - TSS region transcription start site region 41793
Gm34628 4 56455912 to 56478396 22484 - lncRNA gene predicted gene, 34628
D4Mit314 4 56598247 to 56598394 147 DNA segment DNA Segment, Chr 4, Massachusetts Institute of Technology-314
Gm34687 4 56622955 to 56714425 91470 - lncRNA gene predicted gene, 34687
Tssr41794 4 56673978 to 56673989 11 - TSS region transcription start site region 41794
Gm26144 4 56678904 to 56679035 131 - snoRNA gene predicted gene, 26144
Actl7b 4 56740005 to 56741425 1420 - protein coding gene actin-like 7b
Gm26657 4 56740070 to 56741377 1307 + protein coding gene predicted gene, 26657
Cpgi14320 4 56740298 to 56741229 931 CpG island CpG island 14320
Tssr41795 4 56741403 to 56741417 14 - TSS region transcription start site region 41795
Tssr41796 4 56741423 to 56741435 12 - TSS region transcription start site region 41796
Tssr41797 4 56741446 to 56741447 1 - TSS region transcription start site region 41797
Tssr37346 4 56743406 to 56743438 32 + TSS region transcription start site region 37346
Actl7a 4 56743422 to 56744925 1503 + protein coding gene actin-like 7a
Tssr37347 4 56745914 to 56745918 4 + TSS region transcription start site region 37347
Elp1 4 56749680 to 56802331 52651 - protein coding gene elongator complex protein 1
Tssr41798 4 56757320 to 56757329 9 - TSS region transcription start site region 41798
Tssr41799 4 56757346 to 56757363 17 - TSS region transcription start site region 41799
Gm22952 4 56761922 to 56762041 119 - snoRNA gene predicted gene, 22952
D4Mit288 4 56769379 to 56769494 115 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 288
Tssr41800 4 56789210 to 56789214 4 - TSS region transcription start site region 41800
Cpgi14321 4 56801845 to 56803024 1179 CpG island CpG island 14321
Tssr41801 4 56802242 to 56802262 20 - TSS region transcription start site region 41801
Tssr41802 4 56802265 to 56802322 57 - TSS region transcription start site region 41802
Tssr1177 4 56802316 to 56802327 11 + TSS region transcription start site region 1177
Tssr41803 4 56802325 to 56802330 5 - TSS region transcription start site region 41803
Tssr37348 4 56802337 to 56802359 22 + TSS region transcription start site region 37348
Abitram 4 56802345 to 56809601 7256 + protein coding gene actin binding transcription modulator
Tssr37349 4 56802570 to 56802613 43 + TSS region transcription start site region 37349
Ctnnal1 4 56810935 to 56865188 54253 - protein coding gene catenin (cadherin associated protein), alpha-like 1