MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 4:5584516-6125487

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19 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Gm11781	4	5602924 to 5603395	471	-	pseudogene	predicted gene 11781
Tssr36376	4	5611846 to 5611856	10	+	TSS region	transcription start site region 36376
4930423M02Rik	4	5632328 to 5642284	9956	+	lincRNA gene	RIKEN cDNA 4930423M02 gene
Tssr36377	4	5632331 to 5632340	9	+	TSS region	transcription start site region 36377
Cpgi13998	4	5643825 to 5644860	1035		CpG island	CpG island 13998
Fam110b	4	5644079 to 5801101	157022	+	protein coding gene	family with sequence similarity 110, member B
Tssr36378	4	5644084 to 5644129	45	+	TSS region	transcription start site region 36378
Tssr36379	4	5644133 to 5644211	78	+	TSS region	transcription start site region 36379
Tssr36380	4	5644216 to 5644240	24	+	TSS region	transcription start site region 36380
Tssr36381	4	5644268 to 5644279	11	+	TSS region	transcription start site region 36381
Gm24337	4	5687677 to 5687802	125	-	snoRNA gene	predicted gene, 24337
Tssr36382	4	5724304 to 5724357	53	+	TSS region	transcription start site region 36382
Tssr36383	4	5786673 to 5786675	2	+	TSS region	transcription start site region 36383
Cpgi13999	4	5798251 to 5799067	816		CpG island	CpG island 13999
Gm11796	4	5854516 to 5855487	971	-	pseudogene	predicted gene 11796
D4Mit103	4	5955486 to 5955614	128		DNA segment	DNA segment, Chr 4, Massachusetts Institute of Technology 103
Sm1	4	5955486 to 5955614	128		QTL	susceptibility to Schistosoma mansoni infection 1
Gm18158	4	6025065 to 6025846	781	-	pseudogene	predicted gene, 18158
Gm11797	4	6069901 to 6070627	726	+	pseudogene	predicted gene 11797