MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 4:55498879-55581743

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19 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Gm12507	4	55508294 to 55508708	414	+	pseudogene	predicted gene 12507
Cpgi14316	4	55514563 to 55515381	818		CpG island	CpG island 14316
Klf4	4	55527143 to 55532466	5323	-	protein coding gene	Kruppel-like factor 4 (gut)
Tssr41781	4	55528131 to 55528140	9	-	TSS region	transcription start site region 41781
Tssr41782	4	55528574 to 55528578	4	-	TSS region	transcription start site region 41782
Cpgi14317	4	55530119 to 55533524	3405		CpG island	CpG island 14317
Tssr41783	4	55530938 to 55530956	18	-	TSS region	transcription start site region 41783
Tssr41784	4	55532123 to 55532134	11	-	TSS region	transcription start site region 41784
Tssr41785	4	55532136 to 55532167	31	-	TSS region	transcription start site region 41785
Tssr41786	4	55532179 to 55532238	59	-	TSS region	transcription start site region 41786
Tssr41787	4	55532280 to 55532322	42	-	TSS region	transcription start site region 41787
Tssr41788	4	55532465 to 55532485	20	-	TSS region	transcription start site region 41788
Tssr37339	4	55532711 to 55532764	53	+	TSS region	transcription start site region 37339
Tssr41789	4	55533322 to 55533331	9	-	TSS region	transcription start site region 41789
Cpgi14318	4	55533794 to 55533951	157		CpG island	CpG island 14318
Tssr37340	4	55534647 to 55534690	43	+	TSS region	transcription start site region 37340
Gm34343	4	55538879 to 55541743	2864	+	lncRNA gene	predicted gene, 34343
Tssr37341	4	55540181 to 55540186	5	+	TSS region	transcription start site region 37341
Gm12511	4	55571792 to 55598749	26957	+	lincRNA gene	predicted gene 12511