Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:55000930-55501078

Filter by:
47 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Zfp462 4 54945048 to 55083563 138515 + protein coding gene zinc finger protein 462
Tssr37320 4 55008878 to 55008919 41 + TSS region transcription start site region 37320
Tssr37321 4 55009279 to 55009307 28 + TSS region transcription start site region 37321
9430095M17Rik 4 55020909 to 55021272 363 unclassified gene RIKEN cDNA 9430095M17 gene
Tssr37322 4 55042790 to 55042838 48 + TSS region transcription start site region 37322
Gm10588 4 55043187 to 55044814 1627 unclassified gene predicted gene 10588
Tssr37323 4 55044892 to 55044897 5 + TSS region transcription start site region 37323
Tssr37324 4 55044900 to 55044910 10 + TSS region transcription start site region 37324
Gm42289 4 55060520 to 55069271 8751 - lncRNA gene predicted gene, 42289
Tssr37325 4 55082483 to 55082491 8 + TSS region transcription start site region 37325
Gm12515 4 55116563 to 55116923 360 + pseudogene predicted gene 12515
Gm12514 4 55129708 to 55139159 9451 - lincRNA gene predicted gene 12514
Tssr41777 4 55134831 to 55134837 6 - TSS region transcription start site region 41777
Gm12509 4 55163010 to 55163613 603 + pseudogene predicted gene 12509
Gm34231 4 55207862 to 55238936 31074 + lncRNA gene predicted gene, 34231
Bbaa1 4 55250930 to 55251078 148 QTL B.burgdorferi-associated arthritis 1
D4Mit139 4 55250930 to 55251078 148 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 139
Gm12508 4 55254740 to 55255219 479 + pseudogene predicted gene 12508
Gm12512 4 55282064 to 55282280 216 - pseudogene predicted gene 12512
0910001E24Rik 4 55291570 to 55291812 242 unclassified gene RIKEN cDNA 0910001E24 gene
Gm25419 4 55299655 to 55299845 190 - snoRNA gene predicted gene, 25419
Gm42290 4 55341228 to 55349619 8391 - lncRNA gene predicted gene, 42290
Cpgi14314 4 55349465 to 55350825 1360 CpG island CpG island 14314
Rad23b 4 55350043 to 55392237 42194 + protein coding gene RAD23 homolog B, nucleotide excision repair protein
Tssr37326 4 55350043 to 55350078 35 + TSS region transcription start site region 37326
Tssr37327 4 55351323 to 55351334 11 + TSS region transcription start site region 37327
Tssr37328 4 55356499 to 55356534 35 + TSS region transcription start site region 37328
Tssr37329 4 55366810 to 55366822 12 + TSS region transcription start site region 37329
Tssr37330 4 55368039 to 55368053 14 + TSS region transcription start site region 37330
Tssr37331 4 55370194 to 55370337 143 + TSS region transcription start site region 37331
Gm12516 4 55392317 to 55392701 384 - pseudogene predicted gene 12516
Gm34290 4 55393796 to 55399385 5589 - lncRNA gene predicted gene, 34290
Tssr41778 4 55399049 to 55399067 18 - TSS region transcription start site region 41778
Gm12513 4 55408956 to 55409307 351 - pseudogene predicted gene 12513
Gm12505 4 55410443 to 55418842 8399 - lincRNA gene predicted gene 12505
Gm12510 4 55450684 to 55465814 15130 - lincRNA gene predicted gene 12510
Tssr37332 4 55464598 to 55464616 18 + TSS region transcription start site region 37332
Gm22150 4 55469025 to 55469159 134 - snoRNA gene predicted gene, 22150
Tssr41779 4 55475379 to 55475401 22 - TSS region transcription start site region 41779
Tssr41780 4 55477382 to 55477402 20 - TSS region transcription start site region 41780
Tssr37333 4 55477584 to 55477595 11 + TSS region transcription start site region 37333
Tssr37334 4 55477726 to 55477767 41 + TSS region transcription start site region 37334
Tssr37335 4 55477872 to 55477883 11 + TSS region transcription start site region 37335
Tssr37336 4 55477923 to 55477930 7 + TSS region transcription start site region 37336
Tssr37337 4 55478186 to 55478199 13 + TSS region transcription start site region 37337
Tssr37338 4 55480252 to 55480263 11 + TSS region transcription start site region 37338
Cpgi14315 4 55480321 to 55480772 451 CpG island CpG island 14315