MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 4:54979708-55289159

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19 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Zfp462	4	54945048 to 55083563	138515	+	protein coding gene	zinc finger protein 462
Tssr37320	4	55008878 to 55008919	41	+	TSS region	transcription start site region 37320
Tssr37321	4	55009279 to 55009307	28	+	TSS region	transcription start site region 37321
9430095M17Rik	4	55020909 to 55021272	363		unclassified gene	RIKEN cDNA 9430095M17 gene
Tssr37322	4	55042790 to 55042838	48	+	TSS region	transcription start site region 37322
Gm10588	4	55043187 to 55044814	1627		unclassified gene	predicted gene 10588
Tssr37323	4	55044892 to 55044897	5	+	TSS region	transcription start site region 37323
Tssr37324	4	55044900 to 55044910	10	+	TSS region	transcription start site region 37324
Gm42289	4	55060520 to 55069271	8751	-	lncRNA gene	predicted gene, 42289
Tssr37325	4	55082483 to 55082491	8	+	TSS region	transcription start site region 37325
Gm12515	4	55116563 to 55116923	360	+	pseudogene	predicted gene 12515
Gm12514	4	55129708 to 55139159	9451	-	lincRNA gene	predicted gene 12514
Tssr41777	4	55134831 to 55134837	6	-	TSS region	transcription start site region 41777
Gm12509	4	55163010 to 55163613	603	+	pseudogene	predicted gene 12509
Gm34231	4	55207862 to 55238936	31074	+	lncRNA gene	predicted gene, 34231
Bbaa1	4	55250930 to 55251078	148		QTL	B.burgdorferi-associated arthritis 1
D4Mit139	4	55250930 to 55251078	148		DNA segment	DNA segment, Chr 4, Massachusetts Institute of Technology 139
Gm12508	4	55254740 to 55255219	479	+	pseudogene	predicted gene 12508
Gm12512	4	55282064 to 55282280	216	-	pseudogene	predicted gene 12512