Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:53700696-54110820

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Fsd1l 4 53631471 to 53707009 75538 + protein coding gene fibronectin type III and SPRY domain containing 1-like
Tssr37304 4 53712667 to 53712676 9 + TSS region transcription start site region 37304
Fktn 4 53712729 to 53765785 53056 + protein coding gene fukutin
Cpgi14304 4 53713943 to 53714774 831 CpG island CpG island 14304
Tssr37305 4 53714142 to 53714199 57 + TSS region transcription start site region 37305
Gm25445 4 53720902 to 53721200 298 - unclassified non-coding RNA gene predicted gene, 25445
Cpgi14305 4 53779437 to 53779920 483 CpG island CpG island 14305
Tssr37306 4 53779694 to 53779706 12 + TSS region transcription start site region 37306
Tal2 4 53779705 to 53786885 7180 + protein coding gene T cell acute lymphocytic leukemia 2
Rps15a-ps8 4 53791070 to 53791456 386 - pseudogene ribosomal protein S15A, pseudogene 8
D4Mit184 4 53796566 to 53796668 102 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 184
Tssr41773 4 53825883 to 53825893 10 - TSS region transcription start site region 41773
Cpgi14306 4 53825944 to 53826484 540 CpG island CpG island 14306
Tssr37307 4 53826014 to 53826107 93 + TSS region transcription start site region 37307
Tmem38b 4 53826045 to 53862019 35974 + protein coding gene transmembrane protein 38B
Tssr37308 4 53826162 to 53826186 24 + TSS region transcription start site region 37308
D4Mit240 4 53828853 to 53828978 125 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 240
Tssr37309 4 53832570 to 53832582 12 + TSS region transcription start site region 37309
Tssr37310 4 53835122 to 53835123 1 + TSS region transcription start site region 37310
Cpgi14307 4 53859998 to 53860159 161 CpG island CpG island 14307
n-R5s185 4 53860652 to 53860770 118 + rRNA gene nuclear encoded rRNA 5S 185
Gm12468 4 53877925 to 53878328 403 + pseudogene predicted gene 12468
Cpgi14308 4 53878656 to 53879062 406 CpG island CpG island 14308
Gm23745 4 53905696 to 53905820 124 + snoRNA gene predicted gene, 23745
Gm33840 4 53948265 to 53951306 3041 - lncRNA gene predicted gene, 33840
D4Mit320 4 53973679 to 53973791 112 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 320
Gm24177 4 54004057 to 54004187 130 + snoRNA gene predicted gene, 24177
Tssr41774 4 54028746 to 54028753 7 - TSS region transcription start site region 41774
Gm33893 4 54029718 to 54070691 40973 + lncRNA gene predicted gene, 33893